Protein Concepts Dictionary

Tableau information

Concept source:  d1bk1a_  amino acid (a.a.) range (GLY99)(SER183)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY99)  (SER103) E1
	  (SER106)  (ASN117) E2
	  (PHE127)  (SER136) E3
	  (GLY141)  (ALA146) E4
	  (ALA146)  (GLY156) H5
	  (ASN163)  (MET167) E6
	  (MET167)  (SER173) E7
	  (ALA175)  (SER183) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      125.0°   E2                                               
E3      -58.3°  156.9°   E3                                        
E4      119.8°  -65.4°  135.8°   E4                                 
H5      160.5°  -49.4°  135.8°  -41.4°   H5                          
E6      -63.1°  133.8°  -23.3°  157.3°  135.8°   E6                   
E7     -134.1°   61.6°  -99.0°  104.3°   63.2°  -81.6°   E7            
E8       52.9° -113.2°   87.2°  -68.3° -109.4°  105.5° -172.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vula_ :   (GLY110)  (THR192)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1hixa_ :   (GLY105)  (SER188)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Streptomyces sp. s38, xyl1 [TaxId: 181109]
 d1hixb_ :   (GLY105)  (ILE187)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Streptomyces sp. s38, xyl1 [TaxId: 181109]
 d2c1fa_ :   (GLN128)  (THR212)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
 d1ynaa_ :   (GLY106)  (ARG187)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Thermomyces lanuginosus [TaxId: 5541]
 d1enxa_ :   (GLY106)  (SER190)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei, xynII [TaxId: 51453]
 d1m4wa_ :   (GLY105)  (GLU190)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Nonomuraea flexuosa [TaxId: 103836]
 d2vg9a_ :   (GLN126)  (LEU211)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
 d1te1b_ :   (THR102)  (SER189)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Penicillium funiculosum [TaxId: 28572]
 d3wp3a_ :   (GLY139)  (ILE220)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Penicillium funiculosum [TaxId: 28572]
 d1igoa_ :   (GLY112)  (THR194)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus subtilis, B230 [TaxId: 1423]
 d2vgda_ :   (GLY110)  (GLY196)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Escherichia coli [TaxId: 562]
 d4hk9a_ :   (GLY106)  (ILE187)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei [TaxId: 51453]
 d3ri8a_ :    (GLY99)  (SER183)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus kawachii [TaxId: 40384]
 d1bk1a_ :    (GLY99)  (SER183)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus kawachii [TaxId: 40384]
 d1pvxa_ :   (GLY106)  (ASP192)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Paecilomyces variotii, Bainier 1907 [TaxId: 45996]
 d1xyna_ :    (GLY93)  (ASN178)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei, xynI [TaxId: 51453]
 d4hkla_ :   (GLY106)  (SER190)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei [TaxId: 51453]
 d3ri9a_ :    (GLY99)  (SER183)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus kawachii [TaxId: 40384]
 d4hk8a_ :   (GLY106)  (ILE187)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma reesei [TaxId: 51453]
 d1h1aa_ :   (GLY107)  (GLY191)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Chaetomium thermophilum [TaxId: 209285]
 d1xnda_ :   (GLY106)  (SER190)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Trichoderma harzianum [TaxId: 5544]
 d1ukra_ :    (GLY99)  (SER183)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Aspergillus niger [TaxId: 5061]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29