Protein Concepts Dictionary

Tableau information

Concept source:  d3flco1  amino acid (a.a.) range (VAL7)(TRP90)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL7)   (GLY13) E1
	   (SER16)   (ARG24) E2
	   (ILE29)   (GLU35) E3
	   (PHE36)   (LYS42) E4
	   (GLY44)   (ASN49) E5
	   (ALA50)   (SER68) H6
	   (GLY77)   (ASN82) E7
	   (THR86)   (TRP90) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      160.5°   E2                                               
E3      -18.5°  172.3°   E3                                        
E4      -23.8°  144.5°  -29.2°   E4                                 
E5      136.8°  -62.7°  119.4°  139.6°   E5                          
H6      143.4°  -36.4°  151.2° -158.6°   61.4°   H6                   
E7       -9.5°  151.1°  -27.4°  -22.0° -146.3°  140.3°   E7            
E8       99.2°  -98.2°   80.7°   96.2°  -43.4° -104.8°  107.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3h45o1 :     (VAL7)   (TRP90)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
 d3ezwg1 :     (ILE6)   (TRP89)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
 d3g25c1 :     (MSE1)   (TRP88)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4e1jc1 :    (TYR27)  (TRP111)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d1bu6y1 :     (ILE6)   (TRP89)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]
 d3ezwa1 :     (ILE6)   (TRP89)   [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55