Protein Concepts Dictionary

Tableau information

Concept source:  d4c02b_  amino acid (a.a.) range (GLY1)(ASN105)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY1)    (THR6) E1
	   (GLN20)   (HIS25) E2
	   (HIS25)   (LEU30) E3
	   (PHE36)   (SER39) E4
	   (ASN43)   (ARG49) E5
	   (LYS57)   (MET66) H6
	   (GLY69)   (THR77) E7
	   (THR96)  (ASN105) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2       69.0°   E2                                               
E3      132.2°  -69.1°   E3                                        
E4      -63.2° -124.0°  164.7°   E4                                 
E5     -128.5°  156.0°   87.6°   79.9°   E5                          
H6      -34.7°   97.4°  135.6°  -55.3°  -95.0°   H6                   
E7      154.9°  -88.4°  -22.8°  141.9°   70.5°  148.4°   E7            
E8      -47.8°  112.5°  176.4°  -15.8°  -90.3°  -41.7°  157.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fkka_ :     (GLY1)  (LYS105)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FK-506 binding protein (FKBP12), an immunophilin |Cow (Bos taurus) [TaxId: 9913]
 d4c02b_ :     (GLY1)  (ASN105)   [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pbka_ :   (TYR111)  (ASP222)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP25 |Human (Homo sapiens) [TaxId: 9606]
 d4dria_ :    (GLY32)  (GLY139)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4drja_ :    (GLY32)  (GLY139)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP52, N-terminal domains |Human (Homo sapiens) [TaxId: 9606]
 d3kz7a_ :   (TYR111)  (ASP222)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4lava1 :    (GLY32)  (GLU140)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP52, N-terminal domains |Human (Homo sapiens) [TaxId: 9606]
 d3ni6a_ :    (GLY16)  (GLU126)   [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Plasmodium vivax [TaxId: 5855]
 d1eyma_ :     (ILE7)  (LYS105)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FK-506 binding protein (FKBP12), an immunophilin |Human (Homo sapiens) [TaxId: 9606]
 d4bf8a_ :   (GLY289)  (VAL389)   [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2dg4a_ :     (GLY1)  (LYS105)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FK-506 binding protein (FKBP12), an immunophilin |Human (Homo sapiens) [TaxId: 9606]
 d4lawb1 :    (GLY32)  (GLU136)   [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP52, N-terminal domains |Human (Homo sapiens) [TaxId: 9606]
 d3ihzb_ :    (LEU22)  (GLU126)   [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Plasmodium vivax [TaxId: 5855]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.26