Protein Concepts Dictionary

Tableau information

Concept source:  d1qs8b_  amino acid (a.a.) range (LEU257)(ILE324)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU257)  (ALA262) E1
	  (ASN263)  (GLU269) E2
	  (TYR273)  (LEU278) E3
	  (THR283)  (MET289) E4
	  (ASN297)  (ASP303) E5
	  (ASP303)  (TYR309) H6
	  (PHE310)  (ASP314) E7
	  (SER319)  (ILE324) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      175.9°   E2                                               
E3      166.5°    9.4°   E3                                        
E4       30.8°  147.8°  142.5°   E4                                 
E5     -115.7°   61.2°   55.1°  124.2°   E5                          
H6      -66.4°  112.6°  110.9°  -93.7°  -60.7°   H6                   
E7       35.9° -142.2° -136.2°    6.8° -119.8°   95.9°   E7            
E8     -132.5°   48.3°   52.1° -162.9°   51.1°   69.5°  165.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1miqb_ :   (LEU257)  (ILE324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
 d2qzxa_ :   (ILE262)  (PRO329)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1qs8a_ :   (LEU257)  (ILE324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
 d1qs8b_ :   (LEU257)  (ILE324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
 d3pepa_ :   (ILE258)  (PRO324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Pig (Sus scrofa) [TaxId: 9823]
 d1miqa_ :   (LEU257)  (ILE324)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Plasmepsin (a hemoglobin-degrading enzyme) |Plasmodium vivax [TaxId: 5855]
 d3fv3a_ :   (THR265)  (GLN327)   [view usage] : b.50.1.0 |Acid proteases |Acid proteases |automated matches |automated matches |Candida parapsilosis [TaxId: 5480]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.50