Protein Concepts Dictionary

Tableau information

Concept source:  d1q4ka2  amino acid (a.a.) range (ARG512)(SER592)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG512)  (ARG518) E1
	  (ALA520)  (SER526) E2
	  (GLY528)  (PHE534) E3
	  (HIS538)  (CYS544) E4
	  (ALA548)  (ASP554) E5
	  (ASP558)  (ARG563) E6
	  (ARG563)  (GLU569) H7
	  (CYS573)  (SER592) H8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      171.8°   E2                                               
E3      -22.4°  164.9°   E3                                        
E4      146.2°  -26.1°  168.2°   E4                                 
E5      -44.0°  143.0°  -21.9°  167.5°   E5                          
E6      119.5°  -53.2°  141.8°  -27.4°  163.4°   E6                   
H7       36.3° -135.7°   55.5° -112.9°   73.7°   90.3°   H7            
H8      122.9°  -59.2°  123.8°  -60.9°  123.4°  -64.3° -131.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1umwa2 :   (ARG512)  (ARG594)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1q4kb2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1q4ob2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3hiha2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3rq7a2 :   (ARG512)  (ARG594)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1q4kc2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d4j7bb2 :   (ARG503)  (CYS584)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Zebrafish (Danio rerio) [TaxId: 7955]
 d1q4ka2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d2ogqa2 :   (ARG512)  (SER593)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3p2wa2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1q4oa2 :   (ARG512)  (SER592)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d4hcob2 :   (ARG512)  (ARG594)   [view usage] : d.223.1.2 |Polo-box domain |Polo-box domain |Polo-box duplicated region |Serine/threonine-protein kinase plk C-terminal domain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.223