Protein Concepts Dictionary

Tableau information

Concept source:  d3ojva_  amino acid (a.a.) range (GLN58)(PRO151)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN58)   (ALA63) E1
	   (GLU68)   (SER73) E2
	   (GLY77)   (MET82) E3
	   (GLY86)   (GLY90) E4
	   (LEU99)  (GLU105) E5
	  (TYR109)  (SER114) E6
	  (HIS117)  (ASN121) H7
	  (LEU146)  (PRO151) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      159.8°   E2                                               
E3      -69.3°  124.6°   E3                                        
E4      113.2°  -51.7°  174.7°   E4                                 
E5      -94.4°  103.2°   75.5° -108.5°   E5                          
E6       70.3°  -95.6°  -82.3°   94.1°  156.6°   E6                   
H7      -97.1°  102.7°   59.9° -123.4°  -18.9°  142.0°   H7            
E8     -109.0°   59.4° -171.9°   13.2°  -96.9°  104.7° -113.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ojva_ :    (GLN58)  (PRO151)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3ud8a_ :    (GLN43)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d2afgd_ :    (GLN43)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1ry7a_ :    (GLN58)  (PRO151)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d3udaa_ :    (GLN43)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d1nzka_ :    (GLN43)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
 d2hz9a_ :    (GLN43)  (PRO136)   [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.42