Protein Concepts Dictionary

Tableau information

Concept source:  d2xh6a1  amino acid (a.a.) range (LEU41)(GLY123)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU41)   (GLY47) E1
	   (ASP48)   (GLY53) E2
	   (SER59)   (PRO65) E3
	   (ASN66)   (SER72) E4
	   (SER74)   (ASN84) E5
	   (ASN84)   (SER88) E6
	   (THR92)  (PHE104) H7
	  (GLU110)  (GLY123) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2       91.9°   E2                                               
E3       21.1°  -83.6°   E3                                        
E4     -140.3°  116.3° -158.2°   E4                                 
E5      143.5°   77.5° -122.5°  -73.5°   E5                          
E6     -158.3° -102.9°  172.7°   18.1°  -56.8°   E6                   
H7      -74.0°  162.7°   79.8°  -80.9°  107.7°   93.5°   H7            
E8       33.7°  -74.9°  -13.1° -168.8°  110.3°  166.8°   87.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2xh6b1 :    (LEU41)  (THR121)   [view usage] : f.8.1.3 |Aerolisin/ETX pore-forming domain |Aerolisin/ETX pore-forming domain |Clostridium perfringens enterotoxin (CPE), pore-forming domain |automated matches |Clostridium perfringens [TaxId: 1502]
 d2xh6a1 :    (LEU41)  (GLY123)   [view usage] : f.8.1.3 |Aerolisin/ETX pore-forming domain |Aerolisin/ETX pore-forming domain |Clostridium perfringens enterotoxin (CPE), pore-forming domain |automated matches |Clostridium perfringens [TaxId: 1502]
 d3zixb1 :    (LEU41)  (THR121)   [view usage] : f.8.1.3 |Aerolisin/ETX pore-forming domain |Aerolisin/ETX pore-forming domain |Clostridium perfringens enterotoxin (CPE), pore-forming domain |automated matches |Clostridium perfringens [TaxId: 1502]
 d3am2a2 :    (LEU41)  (THR121)   [view usage] : f.8.1.3 |Aerolisin/ETX pore-forming domain |Aerolisin/ETX pore-forming domain |Clostridium perfringens enterotoxin (CPE), pore-forming domain |Clostridium perfringens enterotoxin (CPE), pore-forming domain |Clostridium perfringens [TaxId: 1502]
 d3ziwb1 :    (LEU41)  (THR121)   [view usage] : f.8.1.3 |Aerolisin/ETX pore-forming domain |Aerolisin/ETX pore-forming domain |Clostridium perfringens enterotoxin (CPE), pore-forming domain |automated matches |Clostridium perfringens [TaxId: 1502]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   f.8