Protein Concepts Dictionary

Tableau information

Concept source:  d1blia1  amino acid (a.a.) range (ALA398)(GLN482)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA398)  (ASP404) E1
	  (ASP407)  (ARG413) E2
	  (ALA420)  (ASP430) E3
	  (LYS436)  (GLY441) E4
	  (GLU447)  (ASP451) E5
	  (SER457)  (ASN463) E6
	  (GLY466)  (ASN473) E7
	  (SER476)  (GLN482) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      169.2°   E2                                               
E3      -15.5°  170.4°   E3                                        
E4      163.7°  -10.4°  160.4°   E4                                 
E5      -56.2°  134.5°  -43.5°  134.3°   E5                          
E6      110.5°  -59.8°  116.7°  -53.6°  148.7°   E6                   
E7      -50.7°  139.8°  -42.2°  143.5°  -16.4°  158.3°   E7            
E8      148.8°  -22.1°  163.8°  -28.3°  151.4°  -53.6°  148.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hvxa1 :   (THR398)  (PRO482)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus stearothermophilus [TaxId: 1422]
 d1e3xa1 :   (ALA398)  (GLN482)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus licheniformis [TaxId: 1402]
 d1blia1 :   (ALA398)  (GLN482)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus licheniformis [TaxId: 1402]
 d1ud2a1 :   (THR395)  (ASN479)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus sp., ksm-k38 [TaxId: 1409]
 d1bplb1 :   (ALA398)  (GLN482)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus licheniformis [TaxId: 1402]
 d1w9xa1 :   (THR400)  (LYS484)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus halmapalus [TaxId: 79882]
 d1wp6a1 :   (LYS400)  (ASN484)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Bacterial alpha-Amylase |Bacillus sp. 707 [TaxId: 1416]
 d2gjpa1 :   (THR400)  (LYS484)   [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Bacillus halmapalus [TaxId: 79882]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.71