Protein Concepts Dictionary

Tableau information

Concept source:  d3knqb1  amino acid (a.a.) range (SER11)(GLY61)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER11)   (GLY15) E1
	   (GLY15)   (ASN19) E2
	   (ASN19)   (ASP23) E3
	   (ASP28)   (ASN32) E4
	   (ILE36)   (ALA40) E5
	   (VAL43)   (THR47) E6
	   (THR51)   (ALA55) E7
	   (ILE56)   (GLY61) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      -78.3°   E2                                               
E3     -113.2°   85.8°   E3                                        
E4       99.1°   80.6°  141.5°   E4                                 
E5      -57.9° -110.1°  -68.8°  149.7°   E5                          
E6       43.1°  -44.5° -121.9°   69.4°  -97.9°   E6                   
E7     -129.9°  147.8°   69.7° -105.5°   80.8°  167.2°   E7            
E8      129.6°   52.3°   76.5°  -66.6°  142.6°  -88.5°  100.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tola1 :    (SER11)   (GLY61)   [view usage] : b.37.1.1 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |Bacteriophage M13 [TaxId: 10870]
 d3knqa1 :    (SER11)   (GLY61)   [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Enterobacteria phage [TaxId: 10864]
 d3dgsa1 :    (SER11)   (PRO59)   [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Bacteriophage fd [TaxId: 10864]
 d2x9aa_ :     (SER9)   (PRO57)   [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Enterobacteria phage [TaxId: 10868]
 d3dgsb1 :    (SER11)   (GLY61)   [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Bacteriophage fd [TaxId: 10864]
 d3knqb1 :    (SER11)   (GLY61)   [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Enterobacteria phage [TaxId: 10864]
 d4eo1a_ :   (PRO124)  (GLY174)   [view usage] : b.37.1.0 |N-terminal domains of the minor coat protein g3p |N-terminal domains of the minor coat protein g3p |automated matches |automated matches |Enterobacteria phage [TaxId: 10867]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.37