Protein Concepts Dictionary

Tableau information

Concept source:  d3w1zd_  amino acid (a.a.) range (SER38)(PRO129)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER38)   (GLU43) E1
	   (VAL48)   (GLU53) E2
	   (VAL62)   (SER68) E3
	   (GLY69)   (GLU80) E4
	   (GLU94)   (SER99) E5
	   (SER99)  (THR105) E6
	  (ILE115)  (PHE119) E7
	  (LEU123)  (PRO129) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      166.3°   E2                                               
E3      -39.5°  153.1°   E3                                        
E4      153.3°  -15.2°  167.0°   E4                                 
E5      -68.2° -121.7°   55.5° -120.2°   E5                          
E6      -21.3°  159.4°  -29.5°  161.4°  -76.9°   E6                   
E7      145.1°  -21.4°  162.8°  -18.0° -138.2°  144.3°   E7            
E8      -23.4°  169.4°  -23.5°  163.7°   48.1°  -29.3°  168.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3w1zd_ :    (SER38)  (PRO129)   [view usage] : b.15.1.0 |HSP20-like chaperones |HSP20-like chaperones |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
 d1gmeb_ :    (ARG45)  (PRO135)   [view usage] : b.15.1.1 |HSP20-like chaperones |HSP20-like chaperones |HSP20 |Small heat shock protein |Wheat (Triticum aestivum) [TaxId: 4565]
 d1gmed_ :    (ALA42)  (VAL134)   [view usage] : b.15.1.1 |HSP20-like chaperones |HSP20-like chaperones |HSP20 |Small heat shock protein |Wheat (Triticum aestivum) [TaxId: 4565]
 d1gmea_ :    (ARG45)  (PRO135)   [view usage] : b.15.1.1 |HSP20-like chaperones |HSP20-like chaperones |HSP20 |Small heat shock protein |Wheat (Triticum aestivum) [TaxId: 4565]
 d2h50a1 :    (ARG45)  (PRO135)   [view usage] : b.15.1.1 |HSP20-like chaperones |HSP20-like chaperones |HSP20 |Small heat shock protein |Wheat (Triticum aestivum) [TaxId: 4565]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.15