Protein Concepts Dictionary

Tableau information

Concept source:  d4r5jb1  amino acid (a.a.) range (LEU397)(LYS502)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU397)  (ILE401) E1
	  (GLY406)  (ILE412) E2
	  (THR420)  (GLU430) E3
	  (SER434)  (VAL440) E4
	  (GLY455)  (GLY461) E5
	  (PRO470)  (ALA480) E6
	  (ILE483)  (ALA488) E7
	  (GLU496)  (LYS502) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      121.8°   E2                                               
E3      -32.0°  152.4°   E3                                        
E4      170.5°  -67.0°  140.0°   E4                                 
E5      -28.4°   95.2°  -57.3°  161.1°   E5                          
E6      156.2°  -52.5°  153.7°  -25.2°  143.8°   E6                   
E7      -21.0°  121.0°  -32.1°  160.1°  -29.0°  172.8°   E7            
E8      154.8°  -78.8°  128.8°  -16.2°  172.1°  -28.6°  158.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4r5ka1 :   (LEU397)  (LYS502)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli [TaxId: 83333]
 d4r5ld1 :   (LEU397)  (THR500)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli [TaxId: 83333]
 d3c7nb1 :   (PRO398)  (ILE503)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |DnaK |Cow (Bos taurus) [TaxId: 9913]
 d1u00a2 :   (LEU396)  (LYS499)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Chaperone protein hscA (Hsc66) |Escherichia coli [TaxId: 562]
 d4r5la1 :   (LEU397)  (LYS502)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli [TaxId: 83333]
 d4f01a1 :   (PRO396)  (LYS502)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4r5jb1 :   (LEU397)  (LYS502)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli [TaxId: 83333]
 d4r5ja1 :   (LEU397)  (ALA503)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli [TaxId: 83333]
 d4r5lb1 :   (LEU397)  (ILE501)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |automated matches |Escherichia coli [TaxId: 83333]
 d1dkya2 :   (PRO396)  (LYS502)   [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |DnaK |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 b.130