Protein Concepts Dictionary

Tableau information

Concept source:  d2cbqa_  amino acid (a.a.) range (ALA2)(PHE78)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ALA2)    (THR8) E1
	   (VAL19)   (GLY25) E2
	   (THR30)   (GLN36) E3
	   (GLN36)   (ASP41) E4
	   (VAL44)   (ALA50) E5
	   (ASP51)   (THR56) E6
	   (GLY61)   (ARG71) E7
	   (GLU74)   (PHE78) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      165.2°   E2                                               
E3      -40.2°  146.6°   E3                                        
E4     -116.8°   74.7°   77.4°   E4                                 
E5       50.0° -123.7°   89.1°  152.7°   E5                          
E6      137.8°  -28.3°  156.1° -102.3°  -99.6°   E6                   
E7      -44.6°  148.6°  -21.0°  -74.1°   84.8° -175.3°   E7            
E8      173.5°  -11.6° -146.2°  -69.6°  123.9°  -36.7° -141.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2mcma_ :     (ALA1)   (GLY77)   [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |Macromycin |Streptomyces macromomyceticus [TaxId: 1917]
 d2cbma_ :     (ALA2)   (PHE78)   [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |automated matches |Streptomyces carzinostaticus [TaxId: 1897]
 d2cbqc_ :     (ALA2)   (LEU77)   [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |automated matches |Streptomyces carzinostaticus [TaxId: 1897]
 d2cbqb_ :     (ALA2)   (PHE78)   [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |automated matches |Streptomyces carzinostaticus [TaxId: 1897]
 d2cboa_ :     (THR4)   (LEU77)   [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |automated matches |Streptomyces carzinostaticus [TaxId: 1897]
 d2cbqa_ :     (ALA2)   (PHE78)   [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |automated matches |Streptomyces carzinostaticus [TaxId: 1897]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1