Protein Concepts Dictionary

Tableau information

Concept source:  d3i4ia_  amino acid (a.a.) range (GLY88)(TYR171)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY88)   (SER92) E1
	   (PHE94)   (GLY98) E2
	  (PRO104)  (LYS115) E3
	  (THR118)  (ASN127) E4
	  (HIS132)  (ASP137) E5
	  (TYR149)  (PRO155) E6
	  (TYR157)  (VAL162) E7
	  (VAL167)  (TYR171) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      -84.7°   E2                                               
E3      130.2° -143.1°   E3                                        
E4      -66.1°   20.1°  163.1°   E4                                 
E5      101.6° -168.0°  -28.7°  167.5°   E5                          
E6      -60.4°   40.5°  159.7°  -24.3°  151.3°   E6                   
E7      110.9° -144.9°  -25.3°  157.1°  -23.1°  171.1°   E7            
E8      -77.2°   21.7°  151.8°  -16.5°  169.9°  -21.1°  166.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1cpma_ :    (GLY28)  (ALA112)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
 d1gbga_ :    (GLY86)  (THR170)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus licheniformis [TaxId: 1402]
 d1cpna_ :    (GLY28)  (THR111)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
 d1maca_ :    (GLY84)  (ALA168)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
 d3o5sa_ :   (GLY114)  (ASN198)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Bacillus subtilis [TaxId: 1423]
 d3i4ia_ :    (GLY88)  (TYR171)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Uncultured murine [TaxId: 314099]
 d1u0aa_ :    (GLY86)  (ALA170)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Paenibacillus macerans [TaxId: 44252]
 d3i4ib_ :    (GLY88)  (ASP172)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Uncultured murine [TaxId: 314099]
 d1byha_ :    (GLY86)  (ALA170)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29