Protein Concepts Dictionary

Tableau information

Concept source:  d1cxka3  amino acid (a.a.) range (ARG412)(ALA495)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG412)  (ASN416) E1
	  (ASP417)  (GLY426) E2
	  (SER427)  (ASN437) E3
	  (ALA440)  (GLY446) E4
	  (GLY454)  (ASP458) E5
	  (ASN467)  (SER473) E6
	  (SER478)  (ALA484) E7
	  (GLY485)  (ALA495) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2     -157.5°   E2                                               
E3       12.7°  169.3°   E3                                        
E4      149.2°  -44.3°  145.2°   E4                                 
E5      -41.0°  119.8°  -49.7°  160.2°   E5                          
E6      135.6°  -56.7°  132.2°  -13.7°  160.2°   E6                   
E7      -36.2°  123.5°  -45.8°  160.2°    5.9° -156.5°   E7            
E8     -167.1°  -11.7°  178.4°  -33.4°  131.4°  -46.3°  135.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1cgta3 :   (ARG412)  (ALA494)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
 d1ukqa3 :   (ARG412)  (ASP495)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
 d3cgta3 :   (ARG412)  (ALA494)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
 d1cdga3 :   (ARG412)  (ALA495)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
 d3wmsa2 :   (ARG444)  (PRO527)   [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Paenibacillus macerans [TaxId: 44252]
 d1a47a3 :   (ARG412)  (SER495)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId: 33950]
 d4jcma2 :   (ARG402)  (GLU485)   [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Bacillus clarkii [TaxId: 79879]
 d1cxka3 :   (ARG412)  (ALA495)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus circulans, different strains [TaxId: 1397]
 d1d7fa3 :   (ARG412)  (ASP495)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus sp., strain 1011 [TaxId: 1409]
 d3vx1a2 :   (ILE387)  (PRO465)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Fungal alpha-amylase |Aspergillus oryzae, Taka-amylase [TaxId: 5062]
 d1qhoa3 :   (ARG413)  (SER495)   [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.71