Protein Concepts Dictionary

Tableau information

Concept source:  d1cxka1  amino acid (a.a.) range (THR498)(ASN574)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR498)  (HIS503) E1
	  (VAL513)  (GLY519) E2
	  (SER525)  (PHE531) E3
	  (THR533)  (GLY538) E4
	  (THR542)  (ASP546) E5
	  (THR547)  (VAL551) E6
	  (ASN562)  (ASN567) E7
	  (GLY570)  (ASN574) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2      125.9°   E2                                               
E3      -52.8°  114.9°   E3                                        
E4       97.2°  -96.0°  145.5°   E4                                 
E5      119.7°   -6.4°  110.4°  -99.0°   E5                          
E6      -67.1°  160.4°  -58.5°   96.7° -161.7°   E6                   
E7      140.4°  -65.4°  165.0°  -43.9°  -71.1°  115.7°   E7            
E8      -47.7°   82.1°  -51.5°  123.8°   75.7° -103.0°  139.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4jcma3 :   (ALA489)  (ASN562)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Bacillus clarkii [TaxId: 79879]
 d1cdga1 :   (THR498)  (ASN578)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus circulans, different strains [TaxId: 1397]
 d3cgta1 :   (GLY501)  (ASN572)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus circulans, different strains [TaxId: 1397]
 d2ibga2 :   (THR469)  (ASN563)   [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Hedgehog receptor iHog |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1cgta1 :   (THR497)  (ASN575)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus circulans, different strains [TaxId: 1397]
 d1a47a1 :   (GLY502)  (ASN574)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId: 33950]
 d1ukqa1 :   (THR498)  (ASN578)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus circulans, different strains [TaxId: 1397]
 d1d7fa1 :   (THR498)  (ASN578)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus sp., strain 1011 [TaxId: 1409]
 d1cyga1 :   (THR494)  (ASP570)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus stearothermophilus [TaxId: 1422]
 d1cxka1 :   (THR498)  (ASN574)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Cyclomaltodextrin glycanotransferase, domain D |Bacillus circulans, different strains [TaxId: 1397]
 d1qhoa1 :   (ALA498)  (ASN570)   [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D |Bacillus stearothermophilus [TaxId: 1422]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1