Protein Concepts Dictionary

Tableau information

Concept source:  d1wuva_  amino acid (a.a.) range (GLY26)(SER117)

nSSEs in this Concept: 8

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY26)   (LYS30) E1
	   (LYS35)   (LYS39) E2
	   (VAL47)   (ASN55) E3
	   (LEU61)   (SER66) E4
	   (SER72)   (ASP78) E5
	   (TRP88)   (LEU99) E6
	  (TYR100)  (ILE106) E7
	  (LEU107)  (SER117) E8

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                      
E2     -160.7°   E2                                               
E3      -51.2°  148.0°   E3                                        
E4      145.1°  -15.6°  162.6°   E4                                 
E5      -32.4°  166.4°  -21.0°  176.1°   E5                          
E6      117.5°  -50.6°  144.3°  -45.2°  131.2°   E6                   
E7      -86.4°   99.7°  -68.0°  102.2°  -81.1° -147.2°   E7            
E8      -55.0°  143.7°   -6.2°  157.3°  -26.5°  149.6°  -62.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1azda_ :    (GLY26)  (LEU115)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Brazilian jackbean (Canavalia brasiliensis) [TaxId: 61861]
 d1fx5b_ :   (GLY145)  (PHE238)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Furze (Ulex europaeus), UEA-I [TaxId: 3902]
 d1wuva_ :    (GLY26)  (SER117)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia gladiata [TaxId: 3824]
 d1ltea_ :   (GLY144)  (PRO238)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Coral tree (Erythrina corallodendron) [TaxId: 3843]
 d1fx5a_ :   (GLY145)  (PHE238)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Furze (Ulex europaeus), UEA-I [TaxId: 3902]
 d3snma_ :    (GLY26)  (LEU115)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia lineata [TaxId: 28957]
 d1fatb_ :   (GLY139)  (SER233)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Phytohemagglutinin-L, PHA-L, also arcelin |French bean (Phaseolus vulgaris) [TaxId: 3885]
 d1oq1c_ :   (THR129)  (GLN216)   [view usage] : b.29.1.17 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Hypothetical protein YesU |Hypothetical protein YesU |Bacillus subtilis [TaxId: 1423]
 d2ovua_ :    (GLY26)  (ASN118)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia gladiata [TaxId: 3824]
 d1uzya_ :   (GLY144)  (PRO238)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
 d3wcsa_ :   (GLY162)  (SER256)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |French bean (Phaseolus vulgaris) [TaxId: 3885]
 d3a0ke_ :    (GLY26)  (LEU115)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Cymbosema roseum [TaxId: 202239]
 d4k1ya_ :    (GLY26)  (ASN118)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia boliviana [TaxId: 232300]
 d2e51a_ :   (GLY138)  (PRO236)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]
 d1n47a_ :   (GLY139)  (ALA233)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]
 d1uzzc_ :   (GLY144)  (PRO238)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
 d1kdka_ :    (ARG75)  (LEU171)   [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Sex hormone-binding globulin |Human (Homo sapiens) [TaxId: 9606]
 d1uzyb_ :   (ILE143)  (PRO238)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
 d3zvxb_ :   (GLY157)  (LEU246)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Platypodium elegans [TaxId: 115002]
 d1wbfa_ :   (GLY138)  (PRO236)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]
 d1avba_ :   (ILE129)  (PHE225)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Phytohemagglutinin-L, PHA-L, also arcelin |French bean (Phaseolus vulgaris) [TaxId: 3885]
 d2bqpb_ :   (GLY138)  (SER234)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Pea (Pisum sativum) [TaxId: 3888]
 d1oq1a_ :   (THR129)  (ARG220)   [view usage] : b.29.1.17 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Hypothetical protein YesU |Hypothetical protein YesU |Bacillus subtilis [TaxId: 1423]
 d2d3pa_ :    (GLY26)  (LEU115)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Cratylia argentea [TaxId: 83131]
 d1bxha_ :    (GLY26)  (ASN118)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Jack bean (Canavalia ensiformis) [TaxId: 3823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29