Protein Concepts Dictionary

Tableau information

Concept source:  d3m00a1  amino acid (a.a.) range (GLN37)(ARG157)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLN37)   (ALA59) H1
	   (LEU64)   (GLY78) H2
	   (GLU84)   (ASN98) H3
	  (ASP103)  (GLY118) H4
	  (SER122)  (GLN130) H5
	  (LYS137)  (ASP143) H6
	  (VAL144)  (ARG157) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2     -160.5°   H2                                        
H3       19.2° -144.0°   H3                                 
H4     -118.6°   52.3° -120.0°   H4                          
H5       69.7° -114.1°   61.9° -161.6°   H5                   
H6      140.8°  -58.7°  152.1°  -86.3°   96.4°   H6            
H7     -101.6°   63.3°  -97.6°   25.1° -142.7° -109.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hxga1 :    (ASN36)  (ARG157)   [view usage] : a.102.4.1 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpenoid cyclase N-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d5easa1 :    (ASN36)  (ARG157)   [view usage] : a.102.4.1 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpenoid cyclase N-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d3m00a1 :    (GLN37)  (ARG157)   [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d4gaxa1 :    (GLY34)  (ARG153)   [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Artemisia annua [TaxId: 35608]
 d1hxaa1 :    (ASP35)  (ARG157)   [view usage] : a.102.4.1 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpenoid cyclase N-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d3lz9a1 :    (ASN36)  (ARG157)   [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d5eata1 :    (ASN36)  (ARG157)   [view usage] : a.102.4.1 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpenoid cyclase N-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d4fjqa1 :    (GLY34)  (ARG153)   [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Artemisia annua [TaxId: 35608]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.102