Protein Concepts Dictionary

Tableau information

Concept source:  d2o2fa_  amino acid (a.a.) range (THR93)(LEU198)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR93)  (ARG104) H1
	  (TYR105)  (THR119) H2
	  (THR122)  (ARG136) H3
	  (ASN140)  (GLU162) H4
	  (LEU166)  (ARG180) H5
	  (LEU182)  (GLY190) H6
	  (TRP192)  (LEU198) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -84.7°   H2                                        
H3       87.9°  136.7°   H3                                 
H4      -80.6°  -53.9°  163.7°   H4                          
H5      105.6°  110.9°  -32.1°  163.7°   H5                   
H6      110.0°  161.9°   38.2° -136.8°  -56.0°   H6            
H7       61.2° -137.6°   70.6°  -93.6°  102.6°   60.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2yj1c_ :    (SER25)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1bxla_ :    (GLY40)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d1q59a_ :    (ASP44)  (ASP156)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Early antigen protein R |Epstein-Barr virus [TaxId: 10376]
 d1gjha_ :    (GLY46)  (TYR202)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Bcl-2 |Human (Homo sapiens) [TaxId: 9606]
 d1zy3a1 :    (ASP50)  (GLY151)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-w |Human (Homo sapiens) [TaxId: 9606]
 d4a1ua_ :    (SER25)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2o2fa_ :    (THR93)  (LEU198)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Bcl-2 |Human (Homo sapiens) [TaxId: 9606]
 d2imta_ :    (SER69)  (ASN182)   [view usage] : f.1.4.0 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mk3a_ :    (LEU41)  (LEU149)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-w |Human (Homo sapiens) [TaxId: 9606]
 d2lpca_ :    (GLY40)  (LEU154)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d3kj2a_ :   (VAL216)  (HIS320)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2imsa_ :    (SER69)  (LEU181)   [view usage] : f.1.4.0 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fdmb_ :    (SER25)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   f.1