Protein Concepts Dictionary

Tableau information

Concept source:  d4bw7a_  amino acid (a.a.) range (ALA10)(MET145)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA10)   (ASP20) H1
	   (THR28)   (GLY40) H2
	   (THR44)   (ASP56) H3
	   (PHE65)   (LYS94) H4
	  (SER101)  (GLY113) H5
	  (THR117)  (GLU127) H6
	  (TYR138)  (MET145) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      100.1°   H2                                        
H3     -146.3°  113.3°   H3                                 
H4      116.0°  -32.5°   95.7°   H4                          
H5     -145.7°  104.3°  -20.2°   97.2°   H5                   
H6      -36.5° -133.6°  110.2° -151.7°  111.1°   H6            
H7     -125.0°  134.7°   23.2°  110.6°  -39.7°   91.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3clna_ :     (THR5)  (ALA147)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Rat (Rattus rattus) [TaxId: 10117]
 d4bw7a_ :    (ALA10)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d1tcfa_ :    (SER12)  (GLY157)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4bw8b_ :     (THR5)  (MET144)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d4bw8a_ :     (ILE9)  (THR146)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d1ahra_ :     (THR5)  (THR146)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Chicken (Gallus gallus) [TaxId: 9031]
 d2v01a_ :     (THR5)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d2yggb_ :     (THR6)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1clma_ :     (GLU6)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Ciliate (Paramecium tetraurelia) [TaxId: 5888]
 d1osaa_ :     (GLU6)  (MET144)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Ciliate (Paramecium tetraurelia) [TaxId: 5888]
 d1exra_ :     (THR5)  (SER147)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Ciliate (Paramecium tetraurelia) [TaxId: 5888]
 d1rfja_ :     (GLU6)  (ALA147)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Potato (Solanum tuberosum) [TaxId: 4113]
 d1clla_ :     (LEU4)  (ALA147)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d1tn4a_ :    (SER12)  (GLU156)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Troponin C |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2w73f_ :     (GLU6)  (ALA147)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d1ooja_ :     (THR6)  (MET145)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Nematode (Caenorhabditis elegans) [TaxId: 6239]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.39