Tableau information
Concept source: d3ntea1 amino acid (a.a.) range (SER16)(MET144)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER16) (GLU28) H1
(SER33) (LEU43) H2
(THR48) (VAL59) H3
(GLN63) (VAL83) H4
(ARG100) (GLY106) H5
(THR110) (ASN120) H6
(VAL126) (MET144) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -170.2° H2
H3 -44.8° 143.7° H3
H4 114.2° -56.4° -156.7° H4
H5 -100.2° 89.4° -65.6° 136.9° H5
H6 91.0° -85.8° 121.5° 58.7° -97.3° H6
H7 -19.7° 169.7° -26.3° 133.8° -82.0° -100.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1m9ec_ : (PRO17) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1m9xd_ : (SER16) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1m9cd_ : (PRO17) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2x82a_ : (SER16) (ARG144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus type 2 (isolate d194) [TaxId: 11713]
d2m8la1 : (SER16) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1afva_ : (SER16) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1m9yd_ : (ARG18) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d3ntea1 : (SER16) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1m9ed_ : (SER16) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2gonb_ : (SER148) (TYR277) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1ak4c_ : (PRO417) (ARG543) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2xdeb_ : (PRO17) (SER146) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1l6na2 : (PRO149) (TYR277) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d3h4ea1 : (SER16) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]
d2pwma_ : (SER16) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1m9fc_ : (PRO17) (SER146) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2wlva_ : (SER15) (ARG142) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus type 2 (isolate d194) [TaxId: 11713]
d1m9cc_ : (PRO17) (SER146) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1e6jp2 : (PRO17) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d1m9dc_ : (PRO17) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2pwoa_ : (SER16) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2eiaa2 : (GLY19) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |EIAV capsid protein p26 |Equine infectious anemia virus [TaxId: 11665]
d2xdea_ : (PRO17) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1eiaa2 : (TYR20) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |EIAV capsid protein p26 |Equine infectious anemia virus [TaxId: 11665]
d4dged_ : (PRO17) (ILE141) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2lf4a1 : (THR19) (TYR145) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
d1m9fd_ : (SER16) (MET144) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2golb_ : (SER148) (MET276) [view usage] : a.73.1.1 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |HIV-1 capsid protein |Human immunodeficiency virus type 1 [TaxId: 11676]
d2xgva_ : (SER15) (LEU131) [view usage] : a.73.1.0 |Retrovirus capsid protein, N-terminal core domain |Retrovirus capsid protein, N-terminal core domain |automated matches |automated matches |Microcebus murinus [TaxId: 30608]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.73