Protein Concepts Dictionary

Tableau information

Concept source:  d4ecia2  amino acid (a.a.) range (LYS88)(VAL200)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS88)   (ILE94) H1
	   (GLN95)  (TYR117) H2
	  (GLN123)  (ALA147) H3
	  (ILE156)  (THR161) H4
	  (TYR162)  (GLY172) H5
	  (ASP179)  (ARG191) H6
	  (ARG191)  (VAL200) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -10.0°   H2                                        
H3     -158.4° -148.8°   H3                                 
H4        9.6°    9.1° -150.2°   H4                          
H5       20.9°   21.4° -143.8°   12.8°   H5                   
H6      -97.4°  -93.6°   81.7° -102.6° -114.8°   H6            
H7      -38.2°  -44.8°  156.4°  -47.8°  -57.6°  -77.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lypa2 :    (VAL92)  (SER198)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
 d3mdka2 :    (VAL90)  (SER196)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
 d1rk4a1 :   (ASP109)  (CYS223)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Chloride intracellular channel 1 (clic1) |Human (Homo sapiens) [TaxId: 9606]
 d1oyjc1 :    (ALA97)  (HIS210)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class tau GST |Rice (Oryza sativa) [TaxId: 4530]
 d4ecia2 :    (LYS88)  (VAL200)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 388272]
 d4deja2 :    (PRO94)  (LEU197)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Idiomarina loihiensis [TaxId: 283942]
 d2r4va2 :   (LYS107)  (CYS229)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vo4a2 :    (PRO89)  (SER198)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d2pera2 :   (GLU108)  (THR238)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qr6a2 :   (ASN100)  (CYS223)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3wd6a2 :   (PRO113)  (LEU225)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
 d3mdkb2 :    (PRO89)  (SER196)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
 d1yy7a2 :    (PRO93)  (SER199)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Yersinia pestis [TaxId: 632]
 d3lfla2 :   (PRO107)  (LEU215)   [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4chsb2 :    (PRO89)  (SER198)   [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.45