Protein Concepts Dictionary

Tableau information

Concept source:  d1e6ia_  amino acid (a.a.) range (ALA334)(ILE431)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA334)  (HIS346) H1
	  (ALA349)  (PRO355) H2
	  (ASP363)  (ILE368) H3
	  (LEU374)  (ASN384) H4
	  (ASN384)  (MET389) H5
	  (MET389)  (TYR406) H6
	  (SER412)  (ILE431) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2     -118.2°   H2                                        
H3      140.7°  -90.0°   H3                                 
H4     -161.9°  -57.0°  -56.5°   H4                          
H5       96.5°  132.2°   46.0°  -98.3°   H5                   
H6       21.6°  109.5°  127.0°  166.5°   90.5°   H6            
H7      151.0°  -87.8°  -42.1°  -31.5°  -71.4° -160.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2d9ea_ :     (SER6)   (GLU98)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4uyea_ :   (LEU630)  (GLN724)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1e6ia_ :   (ALA334)  (ILE431)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |GCN5 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4lc2a_ :   (THR631)  (LYS738)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1f68a_ :   (ASP731)  (GLY832)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |GCN5 |Human (Homo sapiens) [TaxId: 9606]
 d2h60a_ :    (LYS11)  (GLU115)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3d7cb_ :   (PRO730)  (GLY833)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1jm4b_ :   (ASP724)  (GLY828)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |P300/CAF histone acetyltransferase bromodomain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.29