Protein Concepts Dictionary

Tableau information

Concept source:  d4lpma_  amino acid (a.a.) range (HIS9)(SER170)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS9)   (ARG39) H1
	   (HIS45)   (GLY73) H2
	   (ASN91)  (LYS120) H3
	  (PRO123)  (TYR133) H4
	  (LEU134)  (GLY155) H5
	  (GLY155)  (GLY160) H6
	  (GLY160)  (SER170) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2     -163.5°   H2                                        
H3     -171.0°   13.8°   H3                                 
H4       15.6°  164.0° -158.7°   H4                          
H5       28.9° -164.1° -158.4°   31.8°   H5                   
H6       34.3° -129.7°  142.1°   46.4°   58.6°   H6            
H7     -119.4°   52.0°   51.6°  112.1°  143.5° -103.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mkua_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d2clua_ :    (HIS13)  (GLY176)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ka3a_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4lpma_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4p18a_ :    (SER10)  (LYS168)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3se1a_ :    (SER10)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3shxa_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d1mfra_ :     (HIS9)  (VAL171)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3ka4a_ :     (HIS9)  (LYS168)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3ka8a_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3sh6a_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25