Protein Concepts Dictionary

Tableau information

Concept source:  d4f6ga_  amino acid (a.a.) range (ASN2)(SER107)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN2)   (HIS18) H1
	   (HIS18)   (LYS24) H2
	   (ALA31)   (ASN38) H3
	   (ASN38)   (GLY57) H4
	   (ASP61)   (GLY71) H5
	   (SER76)   (GLY94) H6
	   (LEU98)  (SER107) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2     -115.1°   H2                                        
H3      143.1°   29.2°   H3                                 
H4      116.8°  100.2°  -77.8°   H4                          
H5      -32.8°   94.1°  122.4° -148.9°   H5                   
H6      132.3° -101.4°  -80.5°  -83.6°  120.6°   H6            
H7      -59.2°   66.7°   87.2°   94.8°  -65.8°  167.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4f6ba_ :     (ASN2)  (SER107)   [view usage] : a.1.1.4 |Globin-like |Globin-like |Nerve tissue mini-hemoglobin (neural globin) |Nerve tissue mini-hemoglobin (neural globin) |Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]
 d2vyya_ :     (TRP3)  (LEU109)   [view usage] : a.1.1.4 |Globin-like |Globin-like |Nerve tissue mini-hemoglobin (neural globin) |Nerve tissue mini-hemoglobin (neural globin) |Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]
 d1kr7a_ :     (TRP3)  (SER107)   [view usage] : a.1.1.4 |Globin-like |Globin-like |Nerve tissue mini-hemoglobin (neural globin) |Nerve tissue mini-hemoglobin (neural globin) |Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]
 d4f6ga_ :     (ASN2)  (SER107)   [view usage] : a.1.1.4 |Globin-like |Globin-like |Nerve tissue mini-hemoglobin (neural globin) |Nerve tissue mini-hemoglobin (neural globin) |Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]
 d2xkga_ :     (ASN2)  (SER107)   [view usage] : a.1.1.4 |Globin-like |Globin-like |Nerve tissue mini-hemoglobin (neural globin) |automated matches |Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]
 d2vyza_ :     (TRP3)  (LEU109)   [view usage] : a.1.1.4 |Globin-like |Globin-like |Nerve tissue mini-hemoglobin (neural globin) |Nerve tissue mini-hemoglobin (neural globin) |Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.1