Protein Concepts Dictionary

Tableau information

Concept source:  d1tzwa_  amino acid (a.a.) range (ARG5)(ALA135)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG5)   (ARG22) H1
	   (ASP26)   (LEU35) H2
	   (ASP40)   (ASN57) H3
	   (ILE61)   (GLU70) H4
	   (SER78)   (GLU95) H5
	   (PRO99)  (TYR114) H6
	  (ASN118)  (ALA135) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      129.4°   H2                                        
H3      -41.7°  159.4°   H3                                 
H4      -83.8°   94.2°  -68.1°   H4                          
H5      131.5°  -93.9°  103.4°  117.7°   H5                   
H6      -51.3°   78.9°  -86.6°  -76.6°  164.7°   H6            
H7      105.4° -120.9°   77.5°  114.3°  -27.1°  154.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1eyva_ :    (HIS11)  (MET139)   [view usage] : a.79.1.1 |NusB-like |NusB-like |Antitermination factor NusB |Antitermination factor NusB |Mycobacterium tuberculosis [TaxId: 1773]
 d1sqfa1 :     (LEU7)  (ARG127)   [view usage] : a.79.1.3 |NusB-like |NusB-like |RmsB N-terminal domain-like |Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), N-terminal domain |Escherichia coli [TaxId: 562]
 d3imqa_ :     (ALA4)  (ARG135)   [view usage] : a.79.1.1 |NusB-like |NusB-like |Antitermination factor NusB |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1tzwa_ :     (ARG5)  (ALA135)   [view usage] : a.79.1.1 |NusB-like |NusB-like |Antitermination factor NusB |Antitermination factor NusB |Thermotoga maritima [TaxId: 2336]
 d3d3ba_ :     (ALA4)  (ARG135)   [view usage] : a.79.1.1 |NusB-like |NusB-like |Antitermination factor NusB |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1tzta_ :     (ARG5)  (ALA135)   [view usage] : a.79.1.1 |NusB-like |NusB-like |Antitermination factor NusB |Antitermination factor NusB |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.79