Protein Concepts Dictionary

Tableau information

Concept source:  d3m02a2  amino acid (a.a.) range (THR403)(ASN523)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR403)  (MET415) H1
	  (GLU420)  (LEU426) H2
	  (PRO430)  (ALA447) H3
	  (GLU450)  (GLY456) H4
	  (GLY461)  (GLY470) H5
	  (THR473)  (GLY494) H6
	  (SER502)  (ASN523) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      172.9°   H2                                        
H3      129.8°  -51.1°   H3                                 
H4      124.9°  -62.1°  -66.7°   H4                          
H5     -136.7°   40.4°  -91.0°  -80.1°   H5                   
H6      -25.7°  151.2° -153.8°  128.9°  111.2°   H6            
H7      135.5°  -44.1°   10.1°   71.3°  -82.9° -156.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hm4b_ :   (VAL179)  (ASP307)   [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |Pentalenene synthase |Streptomyces sp., UC5319 [TaxId: 1931]
 d2oa6d_ :   (GLY180)  (THR311)   [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |automated matches |Aspergillus terreus [TaxId: 33178]
 d4kuxa_ :   (GLY174)  (THR305)   [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |automated matches |Aspergillus terreus [TaxId: 33178]
 d1hm7b_ :   (VAL179)  (SER311)   [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |Pentalenene synthase |Streptomyces sp., UC5319 [TaxId: 1931]
 d1n1za2 :   (ALA453)  (ILE571)   [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |(+)-bornyl diphosphate synthase |Garden sage (Salvia officinalis) [TaxId: 38868]
 d3m02a2 :   (THR403)  (ASN523)   [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1hx9a2 :   (THR403)  (ASN523)   [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d5eata2 :   (THR403)  (ILE521)   [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d1hxga2 :   (THR403)  (ASN523)   [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
 d3n0gb2 :   (SER447)  (HIS566)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Populus tremula [TaxId: 80863]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.128