Protein Concepts Dictionary

Tableau information

Concept source:  d2j2fa_  amino acid (a.a.) range (PRO34)(GLU143)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO34)   (ASP44) H1
	   (ASP44)   (GLU49) H2
	   (GLU49)   (LEU55) H3
	   (PHE76)   (LYS88) H4
	   (ASP92)  (GLU106) H5
	  (LEU108)  (LEU118) H6
	  (THR130)  (GLU143) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -46.7°   H2                                        
H3      -66.8°  -40.8°   H3                                 
H4      133.6°   96.4°  105.8°   H4                          
H5      -95.2° -141.5° -128.9°  119.2°   H5                   
H6     -106.5°  138.9° -170.9°   83.3°  -43.8°   H6            
H7       77.8°   37.9°   20.4°  -85.8° -147.9°  168.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j2fc_ :    (PRO34)  (GLU143)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
 d1afra_ :    (PRO33)  (GLY158)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |delta 9-stearoyl-acyl carrier protein desaturase |Castor bean (Ricinus communis) [TaxId: 3988]
 d2uw1b_ :    (PRO28)  (ASN139)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Hedera helix [TaxId: 4052]
 d2j2fb_ :    (PRO34)  (SER157)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]
 d2uw1a_ :    (GLU33)  (GLU138)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Hedera helix [TaxId: 4052]
 d2j2fa_ :    (PRO34)  (GLU143)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Castor bean (Ricinus communis) [TaxId: 3988]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25