Protein Concepts Dictionary

Tableau information

Concept source:  d3o8yb2  amino acid (a.a.) range (GLY419)(ARG518)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY419)  (ASN425) H1
	  (GLY431)  (LEU443) H2
	  (THR444)  (CYS449) H3
	  (PHE450)  (GLY458) H4
	  (TYR468)  (TYR492) H5
	  (ASP496)  (ASP502) H6
	  (ASP502)  (ARG518) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      100.7°   H2                                        
H3       75.1°   89.0°   H3                                 
H4      -26.8°   94.4° -101.0°   H4                          
H5     -160.5°  -59.8° -102.2° -144.5°   H5                   
H6     -107.2° -136.1°  130.3°  -95.6°   89.4°   H6            
H7      -48.8° -132.4°  110.5°  -40.7°  144.4°  -58.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2p0ma1 :   (GLY413)  (GLN509)   [view usage] : a.119.1.2 |Lipoxigenase |Lipoxigenase |Animal lipoxigenases |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d3v98a2 :   (GLY419)  (ARG518)   [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hu9a1 :   (GLY570)  (GLY677)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L3 [TaxId: 3847]
 d3o8yb2 :   (GLY419)  (ARG518)   [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3v92b2 :   (ASN425)  (ARG518)   [view usage] : a.119.1.0 |Lipoxigenase |Lipoxigenase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2iuja2 :   (GLY565)  (GLY672)   [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |automated matches |Soybean (Glycine max) [TaxId: 3847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.119