Protein Concepts Dictionary

Tableau information

Concept source:  d1fpwa_  amino acid (a.a.) range (LYS10)(MET131)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS10)   (CYS15) H1
	   (ASP23)   (CYS38) H2
	   (ALA44)   (PHE56) H3
	   (PRO61)   (PHE72) H4
	   (HIS81)   (SER93) H5
	   (GLU98)  (ASP109) H6
	  (THR117)  (MET131) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      126.8°   H2                                        
H3      -74.9°  121.2°   H3                                 
H4       86.5° -100.0°  138.3°   H4                          
H5      -39.6°  137.0°  -35.5°  115.3°   H5                   
H6      100.7°   27.2° -111.0°  109.0° -112.9°   H6            
H7     -124.0°   95.4°  -50.4° -124.6°  -84.7°  108.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1omra_ :     (GLY7)  (SER134)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
 d1v1fa_ :    (GLU23)  (GLU145)   [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1g8ib_ :     (LYS9)  (GLY133)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Frequenin (neuronal calcium sensor 1) |Human (Homo sapiens) [TaxId: 9606]
 d2lcpa_ :    (PRO10)  (GLY133)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1bjfa_ :    (PRO10)  (VAL132)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Neurocalcin |Cow (Bos taurus) [TaxId: 9913]
 d2r2ia_ :     (ASP5)  (ARG119)   [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d4by5b_ :    (GLN10)  (MET131)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2ehba_ :    (ASP20)  (GLU144)   [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1fpwa_ :    (LYS10)  (MET131)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Frequenin (neuronal calcium sensor 1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2i94a_ :     (LEU9)  (ILE133)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.39