Protein Concepts Dictionary

Tableau information

Concept source:  d2o9ga_  amino acid (a.a.) range (MET1)(ILE176)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)   (PHE29) H1
	   (PHE36)   (VAL54) H2
	   (ASN63)   (GLY74) H3
	   (PRO77)  (SER104) H4
	  (ASP110)  (GLY115) H5
	  (SER130)  (ASP154) H6
	  (ALA162)  (ILE176) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      162.6°   H2                                        
H3      133.1°  -55.4°   H3                                 
H4      -36.4°  131.5°  165.9°   H4                          
H5       84.5° -102.6°  -48.6°  120.1°   H5                   
H6      132.4°  -33.1°  -59.0°  118.6°   91.4°   H6            
H7      -37.2°  158.3°  122.0°  -57.2°   82.9°  168.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ne2c_ :    (GLY46)  (THR190)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
 d4nefa_ :     (ILE7)  (LEU173)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4nefc_ :     (ILE7)  (LEU173)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2abma1 :    (GLY18)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
 d3nkaa_ :     (MET1)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3nkcb_ :    (VAL24)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3nkca_ :    (VAL24)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3nk5a_ :     (MET1)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3d9sa_ :     (SER7)  (LEU174)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ne2e_ :    (GLY46)  (GLY192)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
 d4nefd_ :     (SER2)  (ASN156)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nk5b_ :     (MET1)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4nefb_ :     (SER6)  (PRO160)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nkab_ :     (MET1)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2o9fa_ :     (MET1)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
 d3ne2a_ :    (GLY46)  (THR190)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
 d2o9ga_ :     (MET1)  (ILE176)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.19