Protein Concepts Dictionary

Tableau information

Concept source:  d2osaa_  amino acid (a.a.) range (ASP269)(GLU408)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP269)  (HIS277) H1
	  (PRO282)  (GLY296) H2
	  (SER309)  (ARG321) H3
	  (ASN337)  (LEU350) H4
	  (THR356)  (ILE369) H5
	  (PRO372)  (LYS384) H6
	  (PRO388)  (GLU408) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -89.1°   H2                                        
H3       45.8°  131.2°   H3                                 
H4      109.9° -154.5°  -64.2°   H4                          
H5      118.8°  -45.4°  132.7° -109.2°   H5                   
H6      -57.4° -134.3°  -43.0°   71.2°  175.4°   H6            
H7       97.9°   10.1°  141.1° -149.7°  -43.8°  137.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2osaa_ :   (ASP269)  (GLU408)   [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3byid_ :   (HIS282)  (ALA420)   [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3msxb_ :   (SER366)  (SER499)   [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ow3a_ :    (LEU49)  (ALA183)   [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |p50 RhoGAP domain |Human (Homo sapiens) [TaxId: 9606]
 d1tx4a_ :    (LEU49)  (ALA183)   [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |p50 RhoGAP domain |Human (Homo sapiens) [TaxId: 9606]
 d1pbwb_ :   (ASP117)  (SER254)   [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |p85 alpha subunit RhoGAP domain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.116