Protein Concepts Dictionary

Tableau information

Concept source:  d2e74a_  amino acid (a.a.) range (ASN31)(GLN209)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN31)   (THR55) H1
	   (THR61)   (GLU75) H2
	   (PHE78)  (GLY108) H3
	  (GLU115)  (LEU138) H4
	  (GLN142)  (ILE158) H5
	  (VAL161)  (ARG170) H6
	  (GLN177)  (GLN209) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      109.3°   H2                                        
H3     -151.9°  -97.4°   H3                                 
H4       36.4°  -92.7° -153.8°   H4                          
H5     -111.3°  136.1°   40.6° -130.3°   H5                   
H6       59.9°   50.2°  143.2°  -58.5°  154.7°   H6            
H7     -146.2°  -64.1°   42.5° -156.7°   73.0°  101.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2e74a_ :    (ASN31)  (GLN209)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Mastigocladus laminosus [TaxId: 83541]
 d4ogqa_ :    (ASN31)  (HIS187)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Nostoc sp. [TaxId: 103690]
 d1vf5a_ :    (ILE32)  (ILE206)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cytochrome b6 subunit of the cytochrome b6f complex |Mastigocladus laminosus [TaxId: 83541]
 d1ezvc3 :    (ASN57)  (GLY205)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Mitochondrial cytochrome b subunit, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3cx5c2 :    (ASN57)  (GLY205)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Saccharomyces cerevisiae [TaxId: 764097]
 d1q90b_ :    (ASN31)  (GLN209)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cytochrome b6 subunit of the cytochrome b6f complex |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
 d4i7za_ :    (ASN31)  (HIS187)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Mastigocladus laminosus [TaxId: 83541]
 d2zt9a_ :    (ASN31)  (GLN209)   [view usage] : f.21.1.2 |Heme-binding four-helical bundle |Transmembrane di-heme cytochromes |Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Nostoc sp. [TaxId: 103690]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.21