Tableau information
Concept source: d1r1tb_ amino acid (a.a.) range (PRO30)(LEU118)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HHHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO30) (ALA44) H1
(PRO46) (SER58) H2
(CYS61) (ILE69) H3
(SER72) (ARG87) H4
(LEU88) (LYS93) E5
(ARG96) (LEU102) E6
(HIS105) (LEU118) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -88.0° H2
H3 -66.6° 122.2° H3
H4 -170.4° -83.8° 113.8° H4
E5 62.9° 50.5° 129.0° -114.7° E5
E6 -124.6° -107.6° -60.1° 54.0° 158.0° E6
H7 -70.9° -114.5° 10.1° 107.9° -130.9° 54.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1smtb_ : (ALA29) (GLN119) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |SmtB repressor |Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]
d1r1vb_ : (ASN9) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Metal-sensing transcriptional repressor CzrA |Staphylococcus aureus [TaxId: 1280]
d3df8a_ : (VAL17) (LEU93) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
d3jthb_ : (ASP205) (LEU294) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
d4ggga_ : (ASP11) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |automated matches |Staphylococcus aureus [TaxId: 158879]
d4gggb_ : (THR10) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |automated matches |Staphylococcus aureus [TaxId: 158879]
d1r23b_ : (PRO30) (CYS121) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |SmtB repressor |Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]
d1tqpa1 : (ILE3) (GLY89) [view usage] : a.4.5.56 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Rio2 serine protein kinase N-terminal domain |Rio2 serine protein kinase N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1r1ub_ : (ASN9) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Metal-sensing transcriptional repressor CzrA |Staphylococcus aureus [TaxId: 1280]
d1sfxa_ : (ASN3) (THR105) [view usage] : a.4.5.50 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |TrmB-like |Hypothetical protein AF2008 |Archaeoglobus fulgidus [TaxId: 2234]
d3f72b_ : (ILE29) (GLU117) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |automated matches |Staphylococcus aureus [TaxId: 1280]
d2co5b_ : (ARG4) (ILE91) [view usage] : a.4.5.48 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |F93-like |automated matches |Sulfolobus turreted icosahedral virus [TaxId: 269145]
d2f2eb_ : (LEU18) (ALA88) [view usage] : a.4.5.69 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |HxlR-like |Hypothetical protein PA1607 |Pseudomonas aeruginosa [TaxId: 287]
d1r1uc_ : (ASN9) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Metal-sensing transcriptional repressor CzrA |Staphylococcus aureus [TaxId: 1280]
d2kkoa_ : (LYS8) (LEU101) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Mycobacterium bovis [TaxId: 233413]
d1r1ta_ : (ALA29) (GLN119) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |SmtB repressor |Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]
d3gw2a_ : (ALA10) (ASP98) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Mycobacterium bovis [TaxId: 233413]
d1r23a_ : (ALA29) (CYS121) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |SmtB repressor |Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]
d1r1tb_ : (PRO30) (LEU118) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |SmtB repressor |Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]
d1r22b_ : (ALA29) (TYR111) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |SmtB repressor |Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]
d1tqia1 : (ILE3) (GLY89) [view usage] : a.4.5.56 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Rio2 serine protein kinase N-terminal domain |Rio2 serine protein kinase N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1r1ud_ : (THR10) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Metal-sensing transcriptional repressor CzrA |Staphylococcus aureus [TaxId: 1280]
d3broa1 : (LEU5) (LEU100) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Transcriptional regulator OEOE1854 |Oenococcus oeni [TaxId: 1247]
d3jtha_ : (ASN2) (LEU94) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 216895]
d1zara1 : (ASN2) (GLY89) [view usage] : a.4.5.56 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Rio2 serine protein kinase N-terminal domain |Rio2 serine protein kinase N-terminal domain |Archaeoglobus fulgidus [TaxId: 2234]
d1r1ua_ : (THR10) (ASN99) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Metal-sensing transcriptional repressor CzrA |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4