Protein Concepts Dictionary

Tableau information

Concept source:  d1oqsa_  amino acid (a.a.) range (LEU2)(ASN109)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU2)   (LYS12) H1
	   (GLU17)   (TYR25) H2
	   (GLY26)   (TRP31) H3
	   (ASP39)   (THR54) H4
	   (TYR73)   (GLU78) E5
	   (ASP81)   (ASP86) E6
	   (ASP89)  (ASN109) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2       97.2°   H2                                        
H3     -138.4° -123.5°   H3                                 
H4      148.7°  -90.4°   49.7°   H4                          
E5       15.2°  110.6° -125.9°  137.4°   E5                   
E6      163.4°  -87.2°   43.3°  -14.8°  151.0°   E6            
H7      -31.5°   84.0° -135.5°  174.2°  -44.3°  164.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1y75a_ :     (ASN1)  (ALA104)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Naja sagittifera [TaxId: 195058]
 d1mh2b_ :     (ASN1)  (ALA104)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 3 [TaxId: 195058]
 d2qoga_ :     (GLN4)  (SER109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Crotalus durissus [TaxId: 8732]
 d3mlma_ :     (SER1)   (ASN99)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Neuwied's lancehead (Bothrops neuwiedi pauloensis), different isoforms [TaxId: 95649]
 d2wq5a_ :     (ASN1)  (ALA103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Indian cobra (Naja naja) [TaxId: 35670]
 d1oyfb_ :     (GLU4)  (LEU110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]
 d1q5ta_ :     (ASN1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor [TaxId: 8704]
 d1owsa_ :     (ASN1)  (ALA104)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Indian cobra (Naja naja), a C49 isoform 2 [TaxId: 35670]
 d1jlta_ :     (ASN1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor [TaxId: 8704]
 d1oyfa_ :     (SER1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]
 d2oqdb_ :     (ASP1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Jararacussu (Bothrops jararacussu) [TaxId: 8726]
 d1y75b_ :     (ASN1)  (GLY103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Naja sagittifera [TaxId: 195058]
 d1oqsa_ :     (LEU2)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Siamese russell's viper (Daboia russelli siamensis), RV7 inhibitory subunit [TaxId: 343250]
 d1kvwa_ :     (LEU2)  (LYS108)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Cow (Bos taurus), pancreas [TaxId: 9913]
 d2nota_ :     (LEU2)  (ALA109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Mainland tiger snake (Notechis scutatus scutatus), notechis II-5 [TaxId: 8663]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.133