Protein Concepts Dictionary

Tableau information

Concept source:  d1yc3a_  amino acid (a.a.) range (THR99)(THR174)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR99)  (GLY108) H1
	  (THR115)  (GLY125) H2
	  (ASP127)  (GLY135) H3
	  (PHE138)  (VAL144) H4
	  (GLU146)  (ASN155) E5
	  (GLN159)  (SER165) E6
	  (GLY168)  (THR174) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -37.7°   H2                                        
H3      135.8°  171.1°   H3                                 
H4      -67.0°  -40.6°  148.1°   H4                          
E5      147.7°  150.0°  -28.9°  143.3°   E5                   
E6      -19.0°  -36.5°  140.8°  -52.5°  164.1°   E6            
E7      168.2°  131.7°  -53.9°  107.6°  -35.8°  160.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ygaa_ :    (THR85)  (LEU160)   [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2xhta_ :    (THR99)  (THR174)   [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1us7a_ :    (THR85)  (LEU160)   [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2iora_ :    (THR86)  (ASP166)   [view usage] : d.122.1.0 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1byqa_ :    (THR99)  (THR174)   [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |HSP90 |Human (Homo sapiens) [TaxId: 9606]
 d2xdxa_ :    (THR99)  (THR174)   [view usage] : d.122.1.1 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Heat shock protein 90, HSP90, N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.122