Protein Concepts Dictionary

Tableau information

Concept source:  d3id8a2  amino acid (a.a.) range (ARG333)(CYS457)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG333)  (ASP341) H1
	  (LYS346)  (GLY356) H2
	  (SER360)  (ARG397) H3
	  (ASP400)  (GLY410) E4
	  (SER418)  (LEU430) H5
	  (GLU435)  (GLU440) E6
	  (SER445)  (CYS457) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2     -141.3°   H2                                        
H3     -110.4°  107.4°   H3                                 
E4     -109.5°   42.9°  133.6°   E4                          
H5       91.5° -113.8°  -38.6°  156.7°   H5                   
E6     -111.7°   49.1°  123.7°  -13.4°  156.5°   E6            
H7      128.8°  -89.9°   21.4° -112.3°  -56.9°  103.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hm8a2 :   (LYS789)  (ALA912)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3id8a2 :   (ARG333)  (CYS457)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ig8a2 :   (ASP343)  (LEU470)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), pII [TaxId: 4932]
 d1bg3a2 :   (THR336)  (GLU465)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2nzta4 :   (GLU783)  (GLU913)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4foia2 :   (ASN335)  (GLU465)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d2nzta2 :   (THR336)  (ALA458)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3b8ax2 :   (THR344)  (SER470)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55