Protein Concepts Dictionary

Tableau information

Concept source:  d3jzka_  amino acid (a.a.) range (PRO20)(LEU107)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO20)   (THR26) H1
	   (LYS31)   (GLY42) H2
	   (THR49)   (ARG65) H3
	   (HIS73)   (CYS77) E4
	   (LEU81)   (PHE86) H5
	   (PRO89)   (LYS94) E6
	   (HIS96)  (LEU107) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -93.4°   H2                                        
H3       77.3°   63.5°   H3                                 
E4       26.4°  117.2°   80.2°   E4                          
H5      119.2° -139.2° -142.4° -100.8°   H5                   
E6     -138.8°  -65.6° -117.8°  157.5°   73.6°   E6            
H7       27.2° -111.4°  103.6°   30.6°   93.6° -126.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4oq3d_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4odea_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d1t4ea_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d3tj2a_ :    (ALA21)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4hbma_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4hbmb_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4oq3b_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d3jzra_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d3jzka_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4hg7a_ :    (ALA21)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4dija_ :    (PRO20)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.42