Protein Concepts Dictionary

Tableau information

Concept source:  d3cxia_  amino acid (a.a.) range (SER1)(HIS120)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER1)   (GLY15) H1
	   (PRO18)   (GLY23) H2
	   (ASP39)   (LYS57) H3
	   (TYR73)   (ASP79) E4
	   (THR81)   (GLU86) E5
	   (PRO90)  (ASN109) H6
	  (ASN114)  (HIS120) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2       99.3°   H2                                        
H3      147.8°  -89.8°   H3                                 
E4       15.1°  111.1°  135.0°   E4                          
E5     -158.5°  -82.6°  -11.8°  146.7°   E5                   
H6      -31.3°   85.8°  174.8°  -45.1°  166.7°   H6            
H7     -171.7°   79.3°  -40.5° -169.5°   29.7° -140.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4uy1a_ :     (GLY1)  (TYR110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3g8ha_ :     (SER1)  (LYS116)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Vipera ammodytes [TaxId: 8705]
 d4dcfa_ :     (GLU4)  (LEU112)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Bothrops brazili [TaxId: 157546]
 d1cl5a_ :     (SER1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]
 d1oxra_ :     (LEU2)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 4 [TaxId: 195058]
 d1jltb_ :     (ASN1)  (LEU120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Sand viper (Vipera ammodytes meridionalis), vipoxin catalytic subunit [TaxId: 8704]
 d1oqsb_ :     (ASN1)  (LEU120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Siamese russell's viper (Daboia russelli siamensis), RV4 catalytic subunit [TaxId: 343250]
 d1ppaa_ :     (VAL2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Eastern cottonmouth snake (Agkistrodon piscivorus piscivorus) [TaxId: 8716]
 d1mc2a_ :  (SER1001) (HIS1120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]
 d1g0za_ :     (ASN1)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Indian krait (Bungarus caeruleus), different isoforms [TaxId: 132961]
 d1vpia_ :     (ASN1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor [TaxId: 8704]
 d1s8ga_ :     (SER1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Broad-banded copperhead (Agkistrodon contortrix laticinctus) [TaxId: 37195]
 d3r0ld_ :     (LEU2)  (TYR110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Crotalus durissus [TaxId: 8732]
 d2ok9a_ :     (SER1)  (HIS120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Bothrops pirajai [TaxId: 113192]
 d1fx9a_ :     (ALA1)  (LEU118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Pig (Sus scrofa), pancreas [TaxId: 9823]
 d1bjja_ :     (LEU2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d4rfpa_ :     (GLN4)  (GLN116)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Viridovipera stejnegeri [TaxId: 39682]
 d1mh7a_ :     (ASN1)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), calcium-free isoform 5 [TaxId: 195058]
 d2q2ja_ :     (SER1)  (TYR119)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Bothrops pirajai, Piratoxin-II (PRTX-II) [TaxId: 113192]
 d4kf3a_ :     (SER1)  (ASN120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Bothrops moojeni [TaxId: 98334]
 d3v9ma_ :     (ASN1)  (ILE111)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Pseudechis australis [TaxId: 8670]
 d3vbza_ :     (LEU2)  (ILE111)   [view usage] : a.133.1.0 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |automated matches |automated matches |Oxyuranus scutellatus [TaxId: 8667]
 d1clpa_ :     (SER1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Terciopelo (Bothrops asper), myotoxin I [TaxId: 8722]
 d1m8ta_ :     (HIS1)  (ILE118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |King cobra (Ophiophagus hannah), an acidic isoform [TaxId: 8665]
 d1q6va_ :     (LEU2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]
 d1a3da_ :     (ASN1)  (ILE112)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Indian cobra (Naja naja) [TaxId: 35670]
 d1xxsa_ :     (SER1)  (ASN120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Bothrops moojeni [TaxId: 98334]
 d3p2pa_ :     (ALA1)  (LEU118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Pig (Sus scrofa), pancreas [TaxId: 9823]
 d1le6a_ :     (GLY1)  (TYR110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Human (Homo sapiens), SPLA2 [TaxId: 9606]
 d1mh8a_ :     (ILE2)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), calcium-free isoform 5 [TaxId: 195058]
 d1yxha_ :     (ILE2)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Naja sagittifera [TaxId: 195058]
 d3eloa_ :     (VAL2)  (LEU118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Human (Homo sapiens) [TaxId: 9606]
 d1ln8a_ :     (ASN1)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 4 [TaxId: 195058]
 d1b4wa_ :     (HIS1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d3cxia_ :     (SER1)  (HIS120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Jararacussu (Bothrops jararacussu) [TaxId: 8726]
 d4hg9a_ :     (LEU2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d1qlla_ :     (SER1)  (HIS110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Bothrops pirajai, Piratoxin-II (PRTX-II) [TaxId: 113192]
 d1pa0a_ :     (SER1)  (HIS120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Neuwied's lancehead (Bothrops neuwiedi pauloensis), different isoforms [TaxId: 95649]
 d1tgma_ :     (SER1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Snake (Daboia russellii pulchella), different isoforms [TaxId: 97228]
 d1fe5a_ :     (ASN1)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Indian krait (Bungarus caeruleus), different isoforms [TaxId: 132961]
 d1umvx_ :     (SER1)  (TYR110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Jararacussu (Bothrops jararacussu) [TaxId: 8726]
 d1u73a_ :     (SER1)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Jararacussu (Bothrops jararacussu) [TaxId: 8726]
 d1aypa_ :     (LEU2)  (TYR112)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Human (Homo sapiens), synovial fluid [TaxId: 9606]
 d1vapa_ :     (ASN1)  (TRP109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Eastern cottonmouth snake (Agkistrodon piscivorus piscivorus) [TaxId: 8716]
 d1p7oa_ :     (ASN1)  (PHE118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Small-eye snake (Micropechis ikaheka), different isoforms [TaxId: 66188]
 d2qhda_ :     (VAL2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Saw-scaled viper (Echis carinatus) [TaxId: 40353]
 d1pp2l_ :     (SER1)  (PHE120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Western diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]
 d3g8ga_ :     (SER1)  (TYR110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Vipera ammodytes [TaxId: 8705]
 d2aoza_ :     (ASN1)  (TYR110)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Atropoides nummifer [TaxId: 44730]
 d1pc9a_ :     (SER1)  (HIS120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Neuwied's lancehead (Bothrops neuwiedi pauloensis), different isoforms [TaxId: 95649]
 d1n28a_ :     (ALA1)  (TYR112)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Human (Homo sapiens), synovial fluid [TaxId: 9606]
 d1a2aa_ :     (LEU2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d1aokb_ :     (LEU2)  (LEU120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Sand viper (Vipera ammodytes meridionalis), vipoxin catalytic subunit [TaxId: 8704]
 d3vc0a_ :     (ASN1)  (ILE111)   [view usage] : a.133.1.0 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |automated matches |automated matches |Oxyuranus scutellatus [TaxId: 8667]
 d1po8a_ :     (ASN1)  (ILE113)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Indian krait (Bungarus caeruleus), different isoforms [TaxId: 132961]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.133