Protein Concepts Dictionary

Tableau information

Concept source:  d1yk3c_  amino acid (a.a.) range (GLU54)(ASP135)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU54)   (ARG62) H1
	   (ARG62)   (ALA68) H2
	   (ALA75)   (GLY88) H3
	   (TYR90)   (ILE95) E4
	  (GLY104)  (TRP110) E5
	  (ASP114)  (TYR120) H6
	  (ASP126)  (ASP135) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      -82.3°   H2                                        
H3      111.9°   52.3°   H3                                 
E4       85.9°  167.2° -129.3°   E4                          
E5      -98.5°  -18.3°   36.7°  165.8°   E5                   
H6       45.8°   45.2°  -67.1°  122.1°  -56.4°   H6            
E7       81.0°  155.9° -151.4°  -22.8°  171.2°  125.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1yk3c_ :    (GLU54)  (ASP135)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
 d1yk3d_ :    (GLU54)  (ASP135)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
 d1yk3f_ :    (GLU54)  (ASP135)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
 d1yk3g_ :    (GLU54)  (ASP135)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
 d1yk3h_ :    (ALA53)  (ASP135)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
 d1yk3e_ :    (GLU54)  (ASP135)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.108