Protein Concepts Dictionary

Tableau information

Concept source:  d1m2aa_  amino acid (a.a.) range (SER21)(GLY92)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER21)   (GLY26) H1
	   (SER27)   (ASP41) H2
	   (ASP41)   (THR47) H3
	   (THR47)   (PRO52) E4
	   (PRO63)   (TYR68) E5
	   (GLY71)   (GLN76) E6
	   (LYS78)   (GLY92) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2       71.1°   H2                                        
H3     -174.9° -106.4°   H3                                 
E4     -105.0° -159.3°  -75.7°   E4                          
E5     -111.9°  -43.3°   67.0°  142.6°   E5                   
E6       53.5°  122.8° -127.6°  -51.9°  165.4°   E6            
H7     -105.0°  -41.4°   74.6°  149.9°  -11.0°  157.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1m2aa_ :    (SER21)   (GLY92)   [view usage] : c.47.1.11 |Thioredoxin fold |Thioredoxin-like |Thioredoxin-like 2Fe-2S ferredoxin |Thioredoxin-like 2Fe-2S ferredoxin |Aquifex aeolicus [TaxId: 63363]
 d1m2ba_ :    (SER21)   (GLY92)   [view usage] : c.47.1.11 |Thioredoxin fold |Thioredoxin-like |Thioredoxin-like 2Fe-2S ferredoxin |Thioredoxin-like 2Fe-2S ferredoxin |Aquifex aeolicus [TaxId: 63363]
 d1f37a_ :    (SER21)   (GLY93)   [view usage] : c.47.1.11 |Thioredoxin fold |Thioredoxin-like |Thioredoxin-like 2Fe-2S ferredoxin |Thioredoxin-like 2Fe-2S ferredoxin |Aquifex aeolicus [TaxId: 63363]
 d1f37b_ :    (SER21)   (GLY93)   [view usage] : c.47.1.11 |Thioredoxin fold |Thioredoxin-like |Thioredoxin-like 2Fe-2S ferredoxin |Thioredoxin-like 2Fe-2S ferredoxin |Aquifex aeolicus [TaxId: 63363]
 d1m2ab_ :    (SER21)   (GLY92)   [view usage] : c.47.1.11 |Thioredoxin fold |Thioredoxin-like |Thioredoxin-like 2Fe-2S ferredoxin |Thioredoxin-like 2Fe-2S ferredoxin |Aquifex aeolicus [TaxId: 63363]
 d1m2da_ :    (SER21)   (GLY92)   [view usage] : c.47.1.11 |Thioredoxin fold |Thioredoxin-like |Thioredoxin-like 2Fe-2S ferredoxin |Thioredoxin-like 2Fe-2S ferredoxin |Aquifex aeolicus [TaxId: 63363]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47