Protein Concepts Dictionary

Tableau information

Concept source:  d1pt5a_  amino acid (a.a.) range (ILE305)(VAL370)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE305)  (ILE319) H1
	  (ASP320)  (ASP332) H2
	  (PRO334)  (SER340) E3
	  (SER340)  (LEU346) H4
	  (PRO348)  (GLY354) H5
	  (VAL357)  (GLN361) E6
	  (GLY365)  (VAL370) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      122.3°   H2                                        
E3      -60.7° -162.5°   E3                                 
H4       57.3°  -72.9°   98.9°   H4                          
H5       97.7°   66.1°  -96.7°  -50.3°   H5                   
E6      -65.0°  141.1°  -21.6°  -85.3°  -75.2°   E6            
E7      149.3°   35.0° -148.6°  107.9°   88.4°  145.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xa3a_ :   (TYR288)  (GLY353)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
 d1q6ya_ :   (ILE307)  (VAL372)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
 d3ubmc_ :   (MET324)  (PRO391)   [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Acetobacter aceti [TaxId: 435]
 d3ubmb_ :   (MET324)  (PRO391)   [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Acetobacter aceti [TaxId: 435]
 d2vjoa_ :   (LEU317)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |Oxalobacter formigenes [TaxId: 847]
 d1pt5a_ :   (ILE305)  (VAL370)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
 d1t4ca_ :   (MET318)  (VAL382)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Formyl-CoA transferase |Oxalobacter formigenes [TaxId: 847]
 d1pt8a_ :   (ILE305)  (VAL370)   [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Hypothetical protein YfdW |Escherichia coli [TaxId: 562]
 d3ubma_ :   (MET324)  (PRO391)   [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Acetobacter aceti [TaxId: 435]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.123