Protein Concepts Dictionary

Tableau information

Concept source:  d4jota_  amino acid (a.a.) range (GLY154)(SER225)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY154)  (ILE162) H1
	  (ARG164)  (GLY174) H2
	  (GLU175)  (ALA179) E3
	  (ALA179)  (TRP185) H4
	  (THR189)  (PRO193) E5
	  (GLN195)  (LEU212) H6
	  (LYS215)  (SER225) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      135.3°   H2                                        
E3       46.8° -126.7°   E3                                 
H4       74.9° -146.6°  -82.8°   H4                          
E5      -87.3°   53.9°  -77.1° -159.2°   E5                   
H6       84.5° -139.4°   70.1°   27.8°  141.7°   H6            
H7      104.7°  -74.4°  151.1°   85.0° -110.3°  107.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2q2xa_ :   (ALA151)  (ALA223)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Lyngbya majuscula [TaxId: 276768]
 d3q1tb_ :   (CYS160)  (GLY234)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d3peac_ :   (ALA142)  (GLN213)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3q1te_ :   (CYS160)  (GLY234)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d1o8uc_ :   (GLY155)  (ARG227)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |6-oxo camphor hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d1sg4a1 :   (PRO144)  (ARG217)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d1szob_ :   (GLY155)  (THR226)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |6-oxo camphor hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d1o8ua_ :   (GLY155)  (THR226)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |6-oxo camphor hydrolase |Rhodococcus erythropolis [TaxId: 1833]
 d3r9ta_ :   (GLY144)  (GLY216)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
 d2j5ik_ :   (LEU153)  (LEU229)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2q34a_ :   (ALA151)  (LEU221)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Lyngbya majuscula [TaxId: 276768]
 d1wdka4 :   (GLY150)  (GLU221)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Fatty oxidation complex alpha subunit, N-terminal domain |Pseudomonas fragi [TaxId: 296]
 d2q35a_ :   (ALA151)  (ALA223)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Lyngbya majuscula [TaxId: 276768]
 d3h0uc_ :   (GLY155)  (LEU230)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces avermitilis [TaxId: 33903]
 d2j5ih_ :   (LEU153)  (LEU229)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d1sg4c_ :   (PHE145)  (ALA203)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14