Protein Concepts Dictionary

Tableau information

Concept source:  d1ewxa_  amino acid (a.a.) range (CYS40)(ASP116)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (CYS40)   (PHE57) H1
	   (PHE57)   (ASN62) H2
	   (ASN62)   (PHE67) E3
	   (GLU73)   (MET84) H4
	   (TRP86)   (PRO90) E5
	   (SER94)  (ASN105) H6
	  (PRO110)  (ASP116) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2       63.1°   H2                                        
E3     -157.0°  122.0°   E3                                 
H4      -32.7°  -80.3°  157.4°   H4                          
E5      125.7°   83.0°  -42.6° -158.1°   E5                   
H6       93.2°   68.3° -109.6°   73.5°  113.0°   H6            
E7      -37.0°  -28.6°  138.6°  -62.9°   96.0°   86.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1o81a_ :    (CYS56)  (GLU132)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
 d1o6jb_ :    (THR63)  (GLU132)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
 d1ewxa_ :    (CYS40)  (ASP116)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]
 d1ezka_ :    (THR47)  (ASP116)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]
 d1o73a_ :    (CYS40)  (ASN116)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Trypanosoma brucei brucei [TaxId: 5702]
 d1oc8a_ :    (CYS56)  (GLU132)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
 d1fg4a_ :    (CYS40)  (GLU116)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
 d1i5ga_ :    (PRO42)  (GLU117)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
 d1o8xa_ :    (THR47)  (ASP116)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47