Protein Concepts Dictionary

Tableau information

Concept source:  d3pewa1  amino acid (a.a.) range (ALA100)(VAL197)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA100)  (LYS111) H1
	  (SER116)  (HIS128) H2
	  (PRO130)  (GLN139) E3
	  (GLY143)  (THR154) H4
	  (GLN164)  (PRO170) E5
	  (SER171)  (LYS187) H6
	  (ILE191)  (VAL197) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      165.5°   H2                                        
E3      -10.2° -164.8°   E3                                 
H4      155.6°  -22.4° -165.6°   H4                          
E5      -32.2°  139.8°  -25.2° -156.0°   E5                   
H6      115.1°  -75.2°  120.0°  -58.2°  144.8°   H6            
E7      -58.0°  110.6°  -54.2°  125.3°  -30.8° -171.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j0ua1 :    (ARG46)  (CYS140)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rrma1 :   (ALA100)  (VAL197)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3pewa1 :   (ALA100)  (VAL197)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3fhta1 :   (PRO101)  (VAL198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1veca_ :    (LYS93)  (THR189)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEAD box RNA helicase rck/p54 |Human (Homo sapiens) [TaxId: 9606]
 d3fhcb_ :   (LYS100)  (VAL198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fmob_ :   (LYS100)  (VAL198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fmpb_ :   (LYS100)  (VAL198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3g0ha1 :   (LYS100)  (VAL198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hv8a1 :    (SER14)  (TYR109)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Putative DEAD box RNA helicase |Methanococcus jannaschii [TaxId: 2190]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37