Tableau information
Concept source: d3b1ca_ amino acid (a.a.) range (PRO43)(ASN142)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO43) (GLN55) H1
(SER64) (GLN80) H2
(ASP87) (GLU92) E3
(GLY93) (ALA104) H4
(GLU110) (ASN115) E5
(PRO120) (ASN130) H6
(LYS132) (ASN142) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -169.2° H2
E3 -78.2° 107.9° E3
H4 81.0° -88.2° 121.0° H4
E5 -139.5° 51.1° -84.0° 138.6° E5
H6 47.5° -122.5° 90.7° -38.8° -169.0° H6
E7 -150.0° 40.0° -94.5° 126.2° -12.7° -162.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bjoa_ : (LEU19) (ASP126) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Escherichia coli [TaxId: 562]
d4kxka_ : (PRO35) (MET126) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ycna_ : (SER57) (ARG142) [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
d3m5ua_ : (LEU15) (ALA119) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
d4iy7a_ : (LEU17) (ASP135) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Xanthomonas oryzae [TaxId: 291331]
d4dgta_ : (PRO45) (SER138) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3qgua_ : (GLY106) (ASN195) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d3kgxb_ : (PRO57) (MET148) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2yhka_ : (SER57) (ARG142) [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
d1v2ea_ : (PRO41) (THR134) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Glutamine aminotransferase |Thermus thermophilus [TaxId: 274]
d2ch2a_ : (SER30) (PRO125) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d1orda2 : (CYS159) (LEU241) [view usage] : c.67.1.5 |PLP-dependent transferase-like |PLP-dependent transferases |Ornithine decarboxylase major domain |Ornithine decarboxylase major domain |Lactobacillus sp., strain 30a [TaxId: 1591]
d1lkca_ : (ASN49) (SER126) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |L-threonine-O-3-phosphate decarboxylase CobD |Salmonella enterica [TaxId: 28901]
d4dq6a_ : (PRO45) (PRO139) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1uu2b_ : (ASN46) (PRO124) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d1w3ua_ : (SER41) (ALA121) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d4kyoc_ : (PRO35) (MET126) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fl0b_ : (PRO85) (GLY198) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2z1za_ : (GLU72) (THR184) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3l8ab_ : (VAL42) (ASN142) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1w23a_ : (PRO15) (ALA120) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus alcalophilus [TaxId: 1445]
d1c7na_ : (PRO46) (ASP146) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystalysin |Treponema denticola [TaxId: 158]
d4cbra_ : (PRO35) (THR127) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yoba_ : (PRO35) (MET126) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lc7a_ : (ASN49) (SER126) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |L-threonine-O-3-phosphate decarboxylase CobD |Salmonella enterica [TaxId: 28901]
d3e77b_ : (SER20) (HIS125) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d2fa_ : (PRO44) (ALA144) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Modulator in mal gene expression, MalY |Escherichia coli [TaxId: 562]
d1bt4a_ : (SER41) (ALA121) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d3b1cd_ : (PRO43) (ASN142) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d4my5c_ : (HIS47) (ILE142) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1v2eb_ : (PRO41) (PRO135) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Glutamine aminotransferase |Thermus thermophilus [TaxId: 274]
d4cbsa_ : (PRO35) (MET126) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4kyoa_ : (PRO35) (MET126) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3e77c_ : (HIS19) (HIS125) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qboa_ : (LEU19) (VAL121) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |automated matches |Yersinia pestis [TaxId: 214092]
d1yiya1 : (ASP67) (PRO153) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Kynurenine--oxoglutarate transaminase I |Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]
d2ycpa_ : (SER57) (ARG142) [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
d3hdoa_ : (GLY54) (GLY132) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Geobacter metallireducens [TaxId: 269799]
d2z67a1 : (LYS79) (GLY189) [view usage] : c.67.1.9 |PLP-dependent transferase-like |PLP-dependent transferases |SepSecS-like |Selenocysteinyl-tRNA synthase (SepSecS) |Methanococcus maripaludis [TaxId: 39152]
d4fl0a_ : (PRO85) (GLY198) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1vp4b_ : (TYR63) (ASP152) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Putative aminotransferase TM1131 |Thermotoga maritima [TaxId: 2336]
d3l8aa_ : (VAL42) (ASN142) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d2ez2a_ : (SER57) (ARG142) [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
d2dr1b_ : (PRO33) (VAL123) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2biea1 : (PRO15) (ALA120) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus alcalophilus [TaxId: 1445]
d1n8pa_ : (PHE8) (ASP126) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystathionine gamma-lyase (CYS3) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1c4ka2 : (THR152) (GLN242) [view usage] : c.67.1.5 |PLP-dependent transferase-like |PLP-dependent transferases |Ornithine decarboxylase major domain |Ornithine decarboxylase major domain |Lactobacillus sp., strain 30a [TaxId: 1591]
d1uu1b_ : (ASN46) (PRO124) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Histidinol-phosphate aminotransferase HisC |Thermotoga maritima [TaxId: 2336]
d2ycta_ : (SER57) (ARG142) [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |automated matches |Citrobacter freundii [TaxId: 546]
d3b1ca_ : (PRO43) (ASN142) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d3b1cb_ : (PRO43) (ASN142) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus anginosus [TaxId: 1328]
d3kgwa_ : (ALA56) (MET148) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3e77a_ : (HIS19) (HIS125) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4iy7d_ : (LEU17) (VAL134) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Xanthomonas oryzae [TaxId: 291331]
d1lc5a_ : (ASN49) (SER126) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |L-threonine-O-3-phosphate decarboxylase CobD |Salmonella enterica [TaxId: 28901]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67