Protein Concepts Dictionary

Tableau information

Concept source:  d1dmna_  amino acid (a.a.) range (THR5)(VAL91)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR5)   (VAL22) H1
	   (ILE25)   (MET31) H2
	   (ALA36)   (PRO41) E3
	   (ARG50)   (GLY60) H4
	   (VAL66)   (LEU70) E5
	   (GLY72)   (HIS78) E6
	   (GLY80)   (VAL91) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2     -152.0°   H2                                        
E3      -66.2°  108.6°   E3                                 
H4      -50.1°  141.5°   38.6°   H4                          
E5     -156.4°   46.3°   96.0°  106.3°   E5                   
E6      140.0°   28.9°  135.7°  169.4°  -63.6°   E6            
E7      -17.6° -156.7°  -52.9°   32.6°  138.8° -157.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2geya1 :     (SER2)   (THR84)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Putative hydroxylase AclR |Streptomyces galilaeus [TaxId: 33899]
 d1dmna_ :     (THR5)   (VAL91)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI |Pseudomonas putida [TaxId: 303]
 d4cdla_ :     (THR5)   (VAL91)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |automated matches |Pseudomonas putida [TaxId: 303]
 d2f98c_ :     (GLU3)   (ARG86)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |automated matches |Streptomyces galilaeus [TaxId: 33899]
 d1oh0b_ :   (THR205)  (VAL291)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI |Pseudomonas putida [TaxId: 303]
 d2geyc_ :     (SER2)   (THR84)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Putative hydroxylase AclR |Streptomyces galilaeus [TaxId: 33899]
 d2gbwb_ :     (THR9)  (SER120)   [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
 d2geyb_ :     (SER2)   (THR84)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Putative hydroxylase AclR |Streptomyces galilaeus [TaxId: 33899]
 d2z77a_ :     (SER7)   (ILE92)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
 d2f98a1 :     (SER2)   (ARG86)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Aklanonic acid methyl ester cyclase, AknH |Streptomyces galilaeus [TaxId: 33899]
 d1m98b2 :   (SER198)  (THR277)   [view usage] : d.17.4.6 |Cystatin-like |NTF2-like |Orange carotenoid protein, C-terminal domain |Orange carotenoid protein, C-terminal domain |Arthrospira maxima [TaxId: 129910]
 d3t8ua_ :     (THR3)   (GLU87)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI |Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]
 d2z77d_ :     (SER7)   (ILE92)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
 d2k54a1 :     (SER3)   (ASN85)   [view usage] : d.17.4.29 |Cystatin-like |NTF2-like |Atu0742-like |Uncharacterized protein Atu0742 |Agrobacterium tumefaciens [TaxId: 358]
 d1sjwa_ :     (SER2)   (ARG86)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Nogalonic acid methyl ester cyclase SnoaL |Streptomyces nogalater [TaxId: 38314]
 d2a15a1 :     (SER7)   (ILE92)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis [TaxId: 1773]
 d2f98b_ :     (GLU3)   (GLY85)   [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |automated matches |Streptomyces galilaeus [TaxId: 33899]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.17