Protein Concepts Dictionary

Tableau information

Concept source:  d1gf4a_  amino acid (a.a.) range (CYS6)(ARG101)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (CYS6)   (GLY16) H1
	   (LEU25)   (SER36) H2
	   (ALA42)   (GLY48) E3
	   (ARG50)   (GLY55) E4
	   (ASN60)   (CYS65) H5
	   (CYS81)   (GLN86) H6
	   (ILE89)  (ARG101) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      125.6°   H2                                        
E3      -80.8°   67.9°   E3                                 
E4       96.0° -126.5°  161.6°   E4                          
H5       32.7° -127.0° -111.3°   71.0°   H5                   
H6      126.8° -101.9°  145.7°   31.0°  101.0°   H6            
H7      -65.1°  110.1°   44.2° -118.1°   95.6° -123.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wqoa_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d2lhma_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ouba_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gfaa_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1loza_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1qswa_ :     (ARG5)  (ASP102)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d2meba_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1taya_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ckca_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lhla_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1i22a_ :     (ARG5)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1b5wa_ :     (ARG5)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1cj9a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1jkaa_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1eq5a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ouia_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gf9a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1hnla_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lhma_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gbwa_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1cj8a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ouja_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1b5xa_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1cj7a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gfha_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1tdya_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ouha_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gb3a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1cj6a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1tcya_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lhka_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1wqna_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1b5ua_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gaza_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1hfxa_ :     (CYS6)   (ILE98)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |alpha-Lactalbumin |Guinea pig (Cavia porcellus) [TaxId: 10141]
 d1ge0a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1di3a_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1laaa_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d133la_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lhia_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lyya_ :     (ARG5)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1jkca_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1b7sa_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gfva_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ckfa_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gf7a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d2bqoa_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lz6a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ouea_ :     (ARG5)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1b7ma_ :     (GLU4)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lz5a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1eqea_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1ge1a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gf3a_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1iwta_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1i1za_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gaya_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1lhja_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d2bqna_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1b7ra_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
 d1gfra_ :     (CYS6)  (ARG101)   [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.2