Protein Concepts Dictionary

Tableau information

Concept source:  d1rlcs_  amino acid (a.a.) range (GLU13)(TYR118)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU13)   (PRO19) H1
	   (SER22)   (GLY37) H2
	   (CYS41)   (GLU47) E3
	   (ARG65)   (LYS71) E4
	   (THR81)   (ALA93) H5
	   (GLN96)  (ASP105) E6
	  (CYS112)  (TYR118) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
H2      150.6°   H2                                        
E3      -75.5°  131.5°   E3                                 
E4       87.0°  -86.3°  121.5°   E4                          
H5      -81.4°  128.0°  -17.3°  106.3°   H5                   
E6      123.0°   27.7°  150.6°  -84.5°  154.4°   E6            
E7      -45.0° -158.2°  -49.8°   78.7°  -44.7°  159.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mkvs_ :    (GLU13)  (HIS118)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d4rubs_ :    (GLU13)  (TYR118)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
 d4hhhs_ :    (GLU13)  (HIS118)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d1bwvs_ :    (GLY13)  (ASN118)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Galdieria partita [TaxId: 83374]
 d1aa1c_ :    (GLU13)  (TYR118)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1svdm1 :    (GLU14)  (TYR107)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Halothiobacillus neapolitanus [TaxId: 927]
 d4f0hb_ :   (GLY506)  (ASN601)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |automated matches |Red algae (Galdieria sulphuraria) [TaxId: 130081]
 d2ybvb_ :    (GLU11)  (TYR104)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
 d1rlcs_ :    (GLU13)  (TYR118)   [view usage] : d.73.1.1 |RuBisCO, small subunit |RuBisCO, small subunit |RuBisCO, small subunit |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.73