Protein Concepts Dictionary

Tableau information

Concept source:  d2x1lc1  amino acid (a.a.) range (LEU357)(GLY481)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU357)  (GLY373) H1
	  (ALA375)  (GLU381) E2
	  (ASP384)  (PRO407) H3
	  (MET409)  (ALA429) H4
	  (PRO432)  (SER438) H5
	  (ALA440)  (GLN466) H6
	  (GLU471)  (GLY481) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2       95.7°   E2                                        
H3     -136.9° -111.6°   H3                                 
H4       43.2°   78.0° -169.0°   H4                          
H5       -5.8°   90.2° -141.8°   39.5°   H5                   
H6     -135.2° -114.1°   -2.6° -166.8° -140.3°   H6            
H7       21.4°  -74.8° -151.7°   34.0°   15.7° -151.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4eg6a2 :   (ALA607)  (GLY729)   [view usage] : a.27.1.0 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
 d2csxa2 :   (LEU347)  (GLY467)   [view usage] : a.27.1.0 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
 d2x1la2 :   (ALA354)  (GLY481)   [view usage] : a.27.1.0 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d3kfla2 :   (ALA575)  (GLY697)   [view usage] : a.27.1.0 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Leishmania major [TaxId: 5664]
 d2x1lc1 :   (LEU357)  (GLY481)   [view usage] : a.27.1.0 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.27