Protein Concepts Dictionary

Tableau information

Concept source:  d2iika2  amino acid (a.a.) range (MET318)(PRO423)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET318)  (GLY334) H1
	  (ASP341)  (ASN346) E2
	  (ALA350)  (ARG361) H3
	  (GLY372)  (GLY377) H4
	  (THR383)  (GLY399) H5
	  (TYR403)  (CYS409) E6
	  (GLY413)  (PRO423) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      146.7°   E2                                        
H3      -40.3°  149.3°   H3                                 
H4      116.4°  -49.4°  156.5°   H4                          
H5      -49.9°  157.5°  -51.5°  114.7°   H5                   
E6      150.0°  -18.6°  132.9°  -67.7°  158.7°   E6            
E7      -38.5°  145.6°  -63.1°   96.3°  -27.6°  163.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4jaoa2 :   (LEU253)  (LEU349)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2iikb2 :   (MET318)  (GLY424)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dd5a2 :   (THR311)  (ARG396)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d3goaa2 :   (SER298)  (VAL387)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Salmonella typhimurium [TaxId: 602]
 d1hnha2 :   (GLY209)  (LEU314)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Ketoacyl-ACP synthase III (FabH) |Escherichia coli [TaxId: 562]
 d2wkva2 :   (MET288)  (SER391)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Zoogloea ramigera [TaxId: 350]
 d1wdkc2 :   (ASN302)  (VAL391)   [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) |Pseudomonas fragi [TaxId: 296]
 d2iika2 :   (MET318)  (PRO423)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1teda2 :   (LEU281)  (ARG393)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Polyketide synthase PKS18 |Mycobacterium tuberculosis [TaxId: 1773]
 d3h76a2 :   (THR247)  (PRO329)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d4dfea2 :   (ASP220)  (VAL326)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia xenovorans [TaxId: 266265]
 d2x3ea2 :   (ASP213)  (LYS324)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2wkua2 :   (MET288)  (SER391)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Zoogloea ramigera [TaxId: 350]
 d3v7ia1 :   (ARG277)  (GLU385)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d3h77a2 :   (THR247)  (PRO329)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d2wl4c2 :   (MET288)  (LEU392)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Zoogloea ramigera [TaxId: 350]
 d1ub7a2 :   (ASN210)  (VAL316)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Ketoacyl-ACP synthase III (FabH) |Thermus thermophilus [TaxId: 274]
 d2wl6a2 :   (MET288)  (SER391)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Zoogloea ramigera [TaxId: 350]
 d2wuaa2 :   (GLN349)  (ASP438)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Common sunflower (Helianthus annuus) [TaxId: 4232]
 d1wl4a2 :   (MET293)  (GLN395)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1hn9a2 :   (ASP234)  (LEU314)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Ketoacyl-ACP synthase III (FabH) |Escherichia coli [TaxId: 562]
 d4o99a2 :   (MET289)  (LYS393)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95